RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 CAPZA2P47755 286 aa15.45■□□□□ 0.06
TIMP3-201ENST00000266085 CDH4P55283 916 aa15.45■□□□□ 0.06
TIMP3-201ENST00000266085 CPSF6Q16630 551 aaKnown RBP eCLIP15.45■□□□□ 0.06
TIMP3-201ENST00000266085 ZFP14Q9HCL3 533 aa15.45■□□□□ 0.06
TIMP3-201ENST00000266085 SIX4Q9UIU6 781 aa15.45■□□□□ 0.06
TIMP3-201ENST00000266085 MAPRE3Q9UPY8 281 aa15.45■□□□□ 0.06
TIMP3-201ENST00000266085 ARIH1Q9Y4X5 557 aaPredicted RBP15.45■□□□□ 0.06
TIMP3-201ENST00000266085 URB1O60287 2271 aaKnown RBP15.45■□□□□ 0.06
TIMP3-201ENST00000266085 CLOCKO15516 846 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 IRAK2O43187 625 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 SGTAO43765 313 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 RPP40O75818 363 aaKnown RBP15.44■□□□□ 0.06
TIMP3-201ENST00000266085 COL6A2P12110 1019 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 MFSD1Q9H3U5 465 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 ATAD3AQ9NVI7 634 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 KIAA0100Q14667 2235 aaKnown RBP15.44■□□□□ 0.06
TIMP3-201ENST00000266085 A0A088AWK7 358 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 PKMP14618 531 aaKnown RBP15.44■□□□□ 0.06
TIMP3-201ENST00000266085 PTPN2P17706 415 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 ZNF10P21506 573 aaPredicted RBP15.44■□□□□ 0.06
TIMP3-201ENST00000266085 CRHR1P34998 444 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 ELF3P78545 371 aaPredicted RBP15.44■□□□□ 0.06
TIMP3-201ENST00000266085 IL5RAQ01344 420 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 TRIM60Q495X7 471 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 TMEM26Q6ZUK4 368 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 SAPCD2Q86UD0 394 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 APLFQ8IW19 511 aaPredicted RBP15.44■□□□□ 0.06
TIMP3-201ENST00000266085 UTP15Q8TED0 518 aaKnown RBP15.44■□□□□ 0.06
TIMP3-201ENST00000266085 TMEM109Q9BVC6 243 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 NLNQ9BYT8 704 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 RNPEPL1Q9HAU8 725 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 LEF1Q9UJU2 399 aaPredicted RBP15.44■□□□□ 0.06
TIMP3-201ENST00000266085 PSME2Q9UL46 239 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 STYXL1Q9Y6J8 313 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 LYPLA1O75608 230 aaPredicted RBP15.44■□□□□ 0.06
TIMP3-201ENST00000266085 NTRK1P04629 796 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 FAM58BPP0C7Q3 252 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 TNNI3P19429 210 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 WASP42768 502 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 PTGIRP43119 386 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 USP4Q13107 963 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 ZDHHC13Q8IUH4 622 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 C2orf15Q8WU43 125 aaKnown RBP15.44■□□□□ 0.06
TIMP3-201ENST00000266085 BTN2A2Q8WVV5 523 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 PYDC1Q8WXC3 89 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 TPD52L3Q96J77 140 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 ABCG8Q9H221 673 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 GON4LQ3T8J9 2241 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 CCL22O00626 93 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 TRAFD1O14545 582 aaPredicted RBP15.44■□□□□ 0.06
TIMP3-201ENST00000266085 HCRTO43612 131 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 ZMPSTE24O75844 475 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 RECQL5O94762 991 aaPredicted RBP15.44■□□□□ 0.06
TIMP3-201ENST00000266085 CLTBP09497 229 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 CCL5P13501 91 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 EDNRBP24530 442 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 IL1R2P27930 398 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 MAPKAPK2P49137 400 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 DPYSL2Q16555 572 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 ZCCHC8Q6NZY4 707 aaKnown RBP15.44■□□□□ 0.06
TIMP3-201ENST00000266085 ADGRD1Q6QNK2 874 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 NIPA2Q8N8Q9 360 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 RP9Q8TA86 221 aaKnown RBP15.44■□□□□ 0.06
TIMP3-201ENST00000266085 TNKS2Q9H2K2 1166 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 ARMC7Q9H6L4 198 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 BTRCQ9Y297 605 aa15.44■□□□□ 0.06
TIMP3-201ENST00000266085 CYP7B1O75881 506 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 KCNH1O95259 989 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 NFATC1O95644 943 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 TXNRD3NBQ6F5E7 133 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 CRELD2Q6UXH1 353 aaPredicted RBP15.43■□□□□ 0.06
TIMP3-201ENST00000266085 KIAA0408Q6ZU52 694 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 LDB1Q86U70 411 aaPredicted RBP15.43■□□□□ 0.06
TIMP3-201ENST00000266085 ZNF513Q8N8E2 541 aaPredicted RBP15.43■□□□□ 0.06
TIMP3-201ENST00000266085 AUTS2Q8WXX7 1259 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 BCO2Q9BYV7 579 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 CREBZFQ9NS37 354 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 ENTPD4Q9Y227 616 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 TBC1D30Q9Y2I9 924 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 CNOT3O75175 753 aaKnown RBP15.43■□□□□ 0.06
TIMP3-201ENST00000266085 SMNDC1O75940 238 aaKnown RBP eCLIP15.43■□□□□ 0.06
TIMP3-201ENST00000266085 PABPC1P11940 636 aaKnown RBP15.43■□□□□ 0.06
TIMP3-201ENST00000266085 NEK2P51955 445 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 GDF10P55107 478 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 CERS6Q6ZMG9 384 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 CMASQ8NFW8 434 aaPredicted RBP15.43■□□□□ 0.06
TIMP3-201ENST00000266085 ARNTL2Q8WYA1 636 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 TIFAQ96CG3 184 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 MAGEB10Q96LZ2 347 aaPredicted RBP15.43■□□□□ 0.06
TIMP3-201ENST00000266085 C9orf16Q9BUW7 83 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 RAD21L1Q9H4I0 556 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 RPS6KB2Q9UBS0 482 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 PSMG1O95456 288 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 ANXA6P08133 673 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 CENPAP49450 140 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 PSME3P61289 254 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 RPS7P62081 194 aaKnown RBP15.43■□□□□ 0.06
TIMP3-201ENST00000266085 RPL38P63173 70 aaKnown RBP15.43■□□□□ 0.06
TIMP3-201ENST00000266085 CYP1B1Q16678 543 aa15.43■□□□□ 0.06
TIMP3-201ENST00000266085 RPS24P62847 133 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms