RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 LSSP48449 732 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 SRP54P61011 504 aaKnown RBP9.77□□□□□ -0.85
VPS41-201ENST00000265745 ZBED6P86452 979 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 MTM1Q13496 603 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 NFATC4Q14934 902 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 ELOCQ15369 112 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 CRTC2Q53ET0 693 aaPredicted RBP9.77□□□□□ -0.85
VPS41-201ENST00000265745 TDRD12Q587J7 1177 aaKnown RBP9.77□□□□□ -0.85
VPS41-201ENST00000265745 PERM1Q5SV97 790 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 KCTD16Q68DU8 428 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 TMCO3Q6UWJ1 677 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 ENPP7Q6UWV6 458 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 LRRC69Q6ZNQ3 347 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 NYAP1Q6ZVC0 841 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 DPPA4Q7L190 304 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 RD3Q7Z3Z2 195 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 HID1Q8IV36 788 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 LSMEM2Q8N112 164 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 SDR16C5Q8N3Y7 309 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 FSTL5Q8N475 847 aaPredicted RBP9.77□□□□□ -0.85
VPS41-201ENST00000265745 NIPA2Q8N8Q9 360 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 PLA2G15Q8NCC3 412 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 CPLX3Q8WVH0 158 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 TEKT4Q8WW24 435 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 SCG3Q8WXD2 468 aaKnown RBP9.77□□□□□ -0.85
VPS41-201ENST00000265745 HSPH1Q92598 858 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 NAT6Q93015 286 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 WNT2BQ93097 391 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 GRAMD1AQ96CP6 724 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 SPSB2Q99619 263 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 POLR1BQ9H9Y6 1135 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 NOD2Q9HC29 1040 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.77□□□□□ -0.85
VPS41-201ENST00000265745 IP6K2Q9UHH9 426 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 PADI4Q9UM07 663 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 CAPN11Q9UMQ6 739 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 RAI2Q9Y5P3 530 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 DGKBQ9Y6T7 804 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 DOCK4Q8N1I0 1966 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 FASNP49327 2511 aaKnown RBP9.77□□□□□ -0.85
VPS41-201ENST00000265745 PTPRBP23467 1997 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 A0A1W2PNU3 283 aaPredicted RBP9.76□□□□□ -0.85
VPS41-201ENST00000265745 A8MX80 341 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 CASC3O15234 703 aaKnown RBP9.76□□□□□ -0.85
VPS41-201ENST00000265745 TCEA3O75764 348 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 RASGRP1O95267 797 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 PCCBP05166 539 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 HOXC4P09017 264 aaPredicted RBP9.76□□□□□ -0.85
VPS41-201ENST00000265745 ALPIP09923 528 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 ELFN1P0C7U0 828 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 CTSEP14091 401 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 GM2AP17900 193 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 CR2P20023 1033 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 HSPA9P38646 679 aaKnown RBP9.76□□□□□ -0.85
VPS41-201ENST00000265745 MMP16P51512 607 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 TPM4P67936 248 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 GABREP78334 506 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 SLC25A11Q02978 314 aaKnown RBP9.76□□□□□ -0.85
VPS41-201ENST00000265745 TLE3Q04726 772 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 ESRP1Q6NXG1 681 aaKnown RBP9.76□□□□□ -0.85
VPS41-201ENST00000265745 ALKBH5Q6P6C2 394 aaKnown RBP9.76□□□□□ -0.85
VPS41-201ENST00000265745 CRTC1Q6UUV9 634 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 LRRC49Q8IUZ0 686 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 CBARPQ8N350 705 aaPredicted RBP9.76□□□□□ -0.85
VPS41-201ENST00000265745 PGBD5Q8N414 524 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 ARL10Q8N8L6 244 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 ATL2Q8NHH9 583 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 FUBP1Q96AE4 644 aaKnown RBP9.76□□□□□ -0.85
VPS41-201ENST00000265745 IQCDQ96DY2 449 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 HIC2Q96JB3 615 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 BTBD6Q96KE9 485 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 WDR92Q96MX6 357 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 ZNF578Q96N58 590 aaPredicted RBP9.76□□□□□ -0.85
VPS41-201ENST00000265745 BBC3Q96PG8 261 aaPredicted RBP9.76□□□□□ -0.85
VPS41-201ENST00000265745 NUDCD1Q96RS6 583 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 RBM15Q96T37 977 aaKnown RBP eCLIP9.76□□□□□ -0.85
VPS41-201ENST00000265745 MGME1Q9BQP7 344 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 NUP85Q9BW27 656 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 PRORYQ9H606 182 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 PCDH18Q9HCL0 1135 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 PRDM9Q9NQV7 894 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 GULP1Q9UBP9 304 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 KLQ9UEF7 1012 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 LUC7L2Q9Y383 392 aaKnown RBP9.76□□□□□ -0.85
VPS41-201ENST00000265745 PCDHGC4Q9Y5F7 938 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 TRPM6Q9BX84 2022 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 DOCK9Q9BZ29 2069 aa9.76□□□□□ -0.85
VPS41-201ENST00000265745 TMEM202A6NGA9 273 aa9.75□□□□□ -0.85
VPS41-201ENST00000265745 MYO1FO00160 1098 aa9.75□□□□□ -0.85
VPS41-201ENST00000265745 NTN3O00634 580 aaPredicted RBP9.75□□□□□ -0.85
VPS41-201ENST00000265745 TNFRSF10CO14798 259 aa9.75□□□□□ -0.85
VPS41-201ENST00000265745 SOCS5O75159 536 aa9.75□□□□□ -0.85
VPS41-201ENST00000265745 TNFP01375 233 aa9.75□□□□□ -0.85
VPS41-201ENST00000265745 GYPCP04921 128 aa9.75□□□□□ -0.85
VPS41-201ENST00000265745 ARSEP51690 589 aa9.75□□□□□ -0.85
VPS41-201ENST00000265745 KIAA1024LP59773 190 aa9.75□□□□□ -0.85
VPS41-201ENST00000265745 ERVPABLB-1P60509 514 aa9.75□□□□□ -0.85
VPS41-201ENST00000265745 CCDC173Q0VFZ6 552 aa9.75□□□□□ -0.85
VPS41-201ENST00000265745 COL9A2Q14055 689 aaPredicted RBP9.75□□□□□ -0.85
VPS41-201ENST00000265745 ZNF235Q14590 738 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms