RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 TMEM134Q9H6X4 195 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 ZFP14Q9HCL3 533 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 ZBTB24O43167 697 aaPredicted RBP15.11■□□□□ 0.01
CASC3-201ENST00000264645 OXSR1O95747 527 aaPredicted RBP15.11■□□□□ 0.01
CASC3-201ENST00000264645 GJB1P08034 283 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 DNAJB2P25686 324 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 TAS2R39P59534 338 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 SULT2A1Q06520 285 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 TIMM50Q3ZCQ8 353 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 COLEC12Q5KU26 742 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 NEK10Q6ZWH5 1172 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 CAND1Q86VP6 1230 aaKnown RBP15.11■□□□□ 0.01
CASC3-201ENST00000264645 CAMKK1Q8N5S9 505 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 TKTL2Q9H0I9 626 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 GDAP2Q9NXN4 497 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 PADI4Q9UM07 663 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 C5orf58C9J3I9 102 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 ALDOAP04075 364 aaKnown RBP15.11■□□□□ 0.01
CASC3-201ENST00000264645 KRT6BP04259 564 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 SLC2A3P11169 496 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 IFNA8P32881 189 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 RXRGP48443 463 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 HARS2P49590 506 aaKnown RBP15.11■□□□□ 0.01
CASC3-201ENST00000264645 FCHO2Q0JRZ9 810 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 TAB1Q15750 504 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 MARC1Q5VT66 337 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 ERMP1Q7Z2K6 904 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 BBS7Q8IWZ6 715 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 QKIQ96PU8 341 aaKnown RBP eCLIP15.11■□□□□ 0.01
CASC3-201ENST00000264645 STK32BQ9NY57 414 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 SNTG2Q9NY99 539 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 DTLQ9NZJ0 730 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 TIMM13Q9Y5L4 95 aaPredicted RBP15.11■□□□□ 0.01
CASC3-201ENST00000264645 SPATA31A1Q5TZJ5 1347 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 IGKV6D-41A0A0C4DH26 115 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 C2CD4BA6NLJ0 364 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 BCKDKO14874 412 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 CNPP09543 421 aaKnown RBP15.11■□□□□ 0.01
CASC3-201ENST00000264645 DHRS4L1P0CG22 281 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 PCSK6P29122 969 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 SNAPC2Q13487 334 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 C1DQ13901 141 aaKnown RBP15.11■□□□□ 0.01
CASC3-201ENST00000264645 HNRNPDQ14103 355 aaKnown RBP15.11■□□□□ 0.01
CASC3-201ENST00000264645 INO80DQ53TQ3 878 aaPredicted RBP15.11■□□□□ 0.01
CASC3-201ENST00000264645 TIGD7Q6NT04 549 aaPredicted RBP15.11■□□□□ 0.01
CASC3-201ENST00000264645 PIGZQ86VD9 579 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 KRT73Q86Y46 540 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 FIBCD1Q8N539 461 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 SLC15A4Q8N697 577 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 NIPA2Q8N8Q9 360 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 ZNF420Q8TAQ5 688 aaPredicted RBP15.11■□□□□ 0.01
CASC3-201ENST00000264645 HDHD2Q9H0R4 259 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 CDT1Q9H211 546 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 CLEC4MQ9H2X3 399 aaPredicted RBP15.11■□□□□ 0.01
CASC3-201ENST00000264645 ACTR8Q9H981 624 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 SACM1LQ9NTJ5 587 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 TMEM9Q9P0T7 183 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 MAGEL2Q9UJ55 1249 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 TBC1D30Q9Y2I9 924 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 VWA7Q9Y334 891 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 MFHAS1Q9Y4C4 1052 aa15.11■□□□□ 0.01
CASC3-201ENST00000264645 AKAP12Q02952 1782 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 SAGE2PA6NJ88 616 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 VILLO15195 856 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 CD3EAPO15446 510 aaKnown RBP15.1■□□□□ 0.01
CASC3-201ENST00000264645 RGS10O43665 173 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 PDE9AO76083 593 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 IL7RP16871 459 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 YWHAQP27348 245 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 NMBRP28336 390 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 FMO4P31512 558 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 NOS2P35228 1153 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 NKX2-5P52952 324 aaPredicted RBP15.1■□□□□ 0.01
CASC3-201ENST00000264645 SLC25A11Q02978 314 aaKnown RBP15.1■□□□□ 0.01
CASC3-201ENST00000264645 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.1■□□□□ 0.01
CASC3-201ENST00000264645 C1orf220Q5T0J3 134 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 TMEM126BQ8IUX1 230 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 ACO2Q99798 780 aaKnown RBP15.1■□□□□ 0.01
CASC3-201ENST00000264645 TRMOQ9BU70 441 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 ITM2CQ9NQX7 267 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 SPEF1Q9Y4P9 236 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 MYH11P35749 1972 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 AQP12BA6NM10 295 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 AURKAO14965 403 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 ITGB6P18564 788 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 KRT20P35900 424 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 CLCN5P51795 746 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 HERC3Q15034 1050 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 NCF4Q15080 339 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 MED22Q15528 200 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 SYT16Q17RD7 645 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 PMF1Q6P1K2 205 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 NT5DC4Q86YG4 428 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 AQP12AQ8IXF9 295 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 B3GALNT2Q8NCR0 500 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 STAG3L4Q8TBR4 150 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 HEXDCQ8WVB3 486 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 REXO5Q96IC2 774 aaKnown RBP15.1■□□□□ 0.01
CASC3-201ENST00000264645 HBEGFQ99075 208 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 SAMHD1Q9Y3Z3 626 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms