RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 CBX4O00257 560 aa10.14□□□□□ -0.79
PALB2-201ENST00000261584 MATN2O00339 956 aa10.14□□□□□ -0.79
PALB2-201ENST00000261584 KLF11O14901 512 aa10.14□□□□□ -0.79
PALB2-201ENST00000261584 XYLBO75191 536 aa10.14□□□□□ -0.79
PALB2-201ENST00000261584 CPSF4O95639 269 aaKnown RBP10.14□□□□□ -0.79
PALB2-201ENST00000261584 AP2A1O95782 977 aa10.14□□□□□ -0.79
PALB2-201ENST00000261584 TBX18O95935 607 aa10.14□□□□□ -0.79
PALB2-201ENST00000261584 FTH1P02794 183 aa10.14□□□□□ -0.79
PALB2-201ENST00000261584 CDH3P22223 829 aa10.14□□□□□ -0.79
PALB2-201ENST00000261584 KCNA5P22460 613 aa10.14□□□□□ -0.79
PALB2-201ENST00000261584 SERPINB1P30740 379 aa10.14□□□□□ -0.79
PALB2-201ENST00000261584 OR1G1P47890 313 aa10.14□□□□□ -0.79
PALB2-201ENST00000261584 UAP1L1Q3KQV9 507 aa10.14□□□□□ -0.79
PALB2-201ENST00000261584 SLC27A1Q6PCB7 646 aa10.14□□□□□ -0.79
PALB2-201ENST00000261584 ZC3H7AQ8IWR0 971 aaKnown RBP10.14□□□□□ -0.79
PALB2-201ENST00000261584 ATG16L2Q8NAA4 619 aa10.14□□□□□ -0.79
PALB2-201ENST00000261584 FCRL2Q96LA5 508 aaPredicted RBP10.14□□□□□ -0.79
PALB2-201ENST00000261584 COLEC11Q9BWP8 271 aa10.14□□□□□ -0.79
PALB2-201ENST00000261584 DNAJC5Q9H3Z4 198 aa10.14□□□□□ -0.79
PALB2-201ENST00000261584 ANAPC2Q9UJX6 822 aa10.14□□□□□ -0.79
PALB2-201ENST00000261584 COQ6Q9Y2Z9 468 aa10.14□□□□□ -0.79
PALB2-201ENST00000261584 C10orf71Q711Q0 1435 aa10.14□□□□□ -0.79
PALB2-201ENST00000261584 DAB1O75553 588 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 GLP2RO95838 553 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 LTA4HP09960 611 aaKnown RBP10.13□□□□□ -0.79
PALB2-201ENST00000261584 PPM1FP49593 454 aaPredicted RBP10.13□□□□□ -0.79
PALB2-201ENST00000261584 PRKCQQ04759 706 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 C9orf57Q5W0N0 161 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 RAP1GAP2Q684P5 730 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 SMYD5Q6GMV2 418 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 PIWIL3Q7Z3Z3 882 aaKnown RBP10.13□□□□□ -0.79
PALB2-201ENST00000261584 LINC00523Q86TU6 105 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 NPWQ8N729 165 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 LPCAT1Q8NF37 534 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 OTULINQ96BN8 352 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 C19orf60Q96EN9 201 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 CDCA5Q96FF9 252 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 TPD52L3Q96J77 140 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 BTBD9Q96Q07 612 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 REXO4Q9GZR2 422 aaKnown RBP10.13□□□□□ -0.79
PALB2-201ENST00000261584 SACM1LQ9NTJ5 587 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 VTI1BQ9UEU0 232 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 NUP214P35658 2090 aaPredicted RBP10.13□□□□□ -0.79
PALB2-201ENST00000261584 ASCC3Q8N3C0 2202 aaKnown RBP10.13□□□□□ -0.79
PALB2-201ENST00000261584 TLR5O60602 858 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 TSPAN1O60635 241 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 CYP7B1O75881 506 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 CD4P01730 458 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 CCNA2P20248 432 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 RGS21Q2M5E4 152 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 PCID2Q5JVF3 399 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 FAM117BQ6P1L5 589 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 ZYG11AQ6WRX3 759 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 ATG14Q6ZNE5 492 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 PIWIL4Q7Z3Z4 852 aaKnown RBP10.13□□□□□ -0.79
PALB2-201ENST00000261584 KBTBD6Q86V97 674 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 DNERQ8NFT8 737 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 CASP10Q92851 521 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 ABHD8Q96I13 439 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 RAB26Q9ULW5 256 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 VWA7Q9Y334 891 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 MYO10Q9HD67 2058 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 UPK3BL1B0FP48 263 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 UPK3BL2E5RIL1 263 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 IPO13O94829 963 aaKnown RBP10.13□□□□□ -0.79
PALB2-201ENST00000261584 NADKO95544 446 aaPredicted RBP10.13□□□□□ -0.79
PALB2-201ENST00000261584 CNPP09543 421 aaKnown RBP10.13□□□□□ -0.79
PALB2-201ENST00000261584 GEMP55040 296 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 C1QTNF8P60827 252 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 LIPEQ05469 1076 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 C4orf22Q6V702 233 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 ERO1BQ86YB8 467 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 ZDHHC13Q8IUH4 622 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 UTP15Q8TED0 518 aaKnown RBP10.13□□□□□ -0.79
PALB2-201ENST00000261584 TSPAN17Q96FV3 270 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 SEMA3CQ99985 751 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 GPATCH1Q9BRR8 931 aaKnown RBP10.13□□□□□ -0.79
PALB2-201ENST00000261584 DHRS4Q9BTZ2 278 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 MRIQ9BWK5 157 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 SMURF2Q9HAU4 748 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 RNF181Q9P0P0 153 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 VPS51Q9UID3 782 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 SH3GLB1Q9Y371 365 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 PRKAB1Q9Y478 270 aa10.13□□□□□ -0.79
PALB2-201ENST00000261584 TFECO14948 347 aaPredicted RBP10.12□□□□□ -0.79
PALB2-201ENST00000261584 LSM1O15116 133 aaKnown RBP10.12□□□□□ -0.79
PALB2-201ENST00000261584 VILLO15195 856 aa10.12□□□□□ -0.79
PALB2-201ENST00000261584 HTRA2O43464 458 aaPredicted RBP10.12□□□□□ -0.79
PALB2-201ENST00000261584 KPNA6O60684 536 aa10.12□□□□□ -0.79
PALB2-201ENST00000261584 RXRBP28702 533 aa10.12□□□□□ -0.79
PALB2-201ENST00000261584 GRB7Q14451 532 aa10.12□□□□□ -0.79
PALB2-201ENST00000261584 PTRHD1Q6GMV3 140 aaKnown RBP10.12□□□□□ -0.79
PALB2-201ENST00000261584 ABRAXAS1Q6UWZ7 409 aa10.12□□□□□ -0.79
PALB2-201ENST00000261584 ZNF534Q76KX8 674 aa10.12□□□□□ -0.79
PALB2-201ENST00000261584 C16orf59Q7L2K0 433 aa10.12□□□□□ -0.79
PALB2-201ENST00000261584 ZC3HC1Q86WB0 502 aaKnown RBP10.12□□□□□ -0.79
PALB2-201ENST00000261584 HS3ST5Q8IZT8 346 aa10.12□□□□□ -0.79
PALB2-201ENST00000261584 TTC30BQ8N4P2 665 aa10.12□□□□□ -0.79
PALB2-201ENST00000261584 OR2T34Q8NGX1 318 aa10.12□□□□□ -0.79
PALB2-201ENST00000261584 OR2T3Q8NH03 318 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms