RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 ARMC12Q5T9G4 340 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 SEL1L2Q5TEA6 688 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 NAPEPLDQ6IQ20 393 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 HTR3CQ8WXA8 447 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.85■□□□□ 0.294e-7■□□□□ 10.7
SDCBP-201ENST00000260130 TEKT5Q96M29 485 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 C1QTNF2Q9BXJ5 285 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 AASDHPPTQ9NRN7 309 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 RALGAPA1Q6GYQ0 2036 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 EBAG9O00559 213 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 ARHGAP33O14559 1287 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 WNT9AO14904 365 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 PGLSO95336 258 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 PAK4O96013 591 aaPredicted RBP16.85■□□□□ 0.29
SDCBP-201ENST00000260130 PRKCGP05129 697 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 EIF3EP60228 445 aaKnown RBP16.85■□□□□ 0.29
SDCBP-201ENST00000260130 GNGT1P63211 74 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 ARHGAP8P85298 464 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 GUCY2DQ02846 1103 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 WASHC5Q12768 1159 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 SGCGQ13326 291 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 ADAT2Q7Z6V5 191 aaKnown RBP16.85■□□□□ 0.29
SDCBP-201ENST00000260130 TTC13Q8NBP0 860 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 CXorf40AQ8TE69 158 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 ZIM3Q96PE6 472 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 FAM118BQ9BPY3 351 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 EDEM2Q9BV94 578 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 CARD9Q9H257 536 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 NFU1Q9UMS0 254 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 PHTF1Q9UMS5 762 aa16.85■□□□□ 0.29
SDCBP-201ENST00000260130 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.84■□□□□ 0.29
SDCBP-201ENST00000260130 KCNK3O14649 394 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 MMP20O60882 483 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 CPP00450 1065 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 RBP3P10745 1247 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 RBL1P28749 1068 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 CD38P28907 300 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 CD86P42081 329 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 CARSP49589 748 aaKnown RBP16.84■□□□□ 0.29
SDCBP-201ENST00000260130 FGL2Q14314 439 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 STAT4Q14765 748 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 TTMPQ5BVD1 217 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 ASB12Q8WXK4 309 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 KRT12Q99456 494 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 VAT1Q99536 393 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 FERMT1Q9BQL6 677 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 WRAP53Q9BUR4 548 aaKnown RBP16.84■□□□□ 0.29
SDCBP-201ENST00000260130 ZDHHC5Q9C0B5 715 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 SLC25A51Q9H1U9 297 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 C10orf88Q9H8K7 445 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 DMXL1Q9Y485 3027 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 FZD6O60353 706 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 MMP2P08253 660 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 HNRNPA2B1P22626 353 aaKnown RBP16.84■□□□□ 0.29
SDCBP-201ENST00000260130 CA4P22748 312 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 MMP12P39900 470 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 ATXN3P54252 364 aaPredicted RBP16.84■□□□□ 0.29
SDCBP-201ENST00000260130 SEMG2Q02383 582 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 EIF1ADQ8N9N8 165 aaKnown RBP16.84■□□□□ 0.29
SDCBP-201ENST00000260130 IFT81Q8WYA0 676 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 SKA1Q96BD8 255 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 IMP4Q96G21 291 aaKnown RBP16.84■□□□□ 0.29
SDCBP-201ENST00000260130 PBKQ96KB5 322 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 TDRD1Q9BXT4 1180 aaKnown RBP16.84■□□□□ 0.29
SDCBP-201ENST00000260130 GLOD4Q9HC38 313 aa16.84■□□□□ 0.29
SDCBP-201ENST00000260130 A0A1B0GVT2 93 aa16.83■□□□□ 0.28
SDCBP-201ENST00000260130 A0A1W2PR77 199 aa16.83■□□□□ 0.28
SDCBP-201ENST00000260130 TCRBV7S2A1N4TA0A589 114 aa16.83■□□□□ 0.28
SDCBP-201ENST00000260130 VILLO15195 856 aa16.83■□□□□ 0.28
SDCBP-201ENST00000260130 TM7SF2O76062 418 aa16.83■□□□□ 0.28
SDCBP-201ENST00000260130 PDHA1P08559 390 aa16.83■□□□□ 0.28
SDCBP-201ENST00000260130 NFKBIAP25963 317 aa16.83■□□□□ 0.28
SDCBP-201ENST00000260130 AKT2P31751 481 aa16.83■□□□□ 0.28
SDCBP-201ENST00000260130 GRIK2Q13002 908 aa16.83■□□□□ 0.28
SDCBP-201ENST00000260130 DARS2Q6PI48 645 aaKnown RBP16.83■□□□□ 0.28
SDCBP-201ENST00000260130 LAYNQ6UX15 382 aa16.83■□□□□ 0.28
SDCBP-201ENST00000260130 CDKL3Q8IVW4 592 aaPredicted RBP16.83■□□□□ 0.28
SDCBP-201ENST00000260130 IQCKQ8N0W5 287 aa16.83■□□□□ 0.28
SDCBP-201ENST00000260130 TMEM145Q8NBT3 493 aa16.83■□□□□ 0.28
SDCBP-201ENST00000260130 BCAS4Q8TDM0 211 aa16.83■□□□□ 0.28
SDCBP-201ENST00000260130 PIH1D2Q8WWB5 315 aa16.83■□□□□ 0.28
SDCBP-201ENST00000260130 ARL8AQ96BM9 186 aa16.83■□□□□ 0.28
SDCBP-201ENST00000260130 RBM15Q96T37 977 aaKnown RBP eCLIP16.83■□□□□ 0.28
SDCBP-201ENST00000260130 GTPBP2Q9BX10 602 aaKnown RBP16.83■□□□□ 0.28
SDCBP-201ENST00000260130 FZD3Q9NPG1 666 aa16.83■□□□□ 0.28
SDCBP-201ENST00000260130 ANKRD6Q9Y2G4 727 aa16.83■□□□□ 0.28
SDCBP-201ENST00000260130 CDX4O14627 284 aaPredicted RBP16.82■□□□□ 0.28
SDCBP-201ENST00000260130 WNT1P04628 370 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 CCT5P48643 541 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 LIG3P49916 1009 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 BNC1Q01954 994 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 DPPA4Q7L190 304 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 PID1Q7Z2X4 250 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 SLC13A5Q86YT5 568 aaPredicted RBP16.82■□□□□ 0.28
SDCBP-201ENST00000260130 NDUFAF2Q8N183 169 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 ZNF567Q8N184 647 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 MFSD2AQ8NA29 543 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 SCRN2Q96FV2 425 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 LENG8Q96PV6 779 aaPredicted RBP16.82■□□□□ 0.28
SDCBP-201ENST00000260130 MYOCQ99972 504 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms