RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 ABCG8Q9H221 673 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 OLAHQ9NV23 265 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 SSC5DA1L4H1 1573 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 H3BNH8 94 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 DAB1O75553 588 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 CD4P01730 458 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 PIK3CGP48736 1102 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 KPNA2P52292 529 aaKnown RBP12□□□□□ -0.49
USHBP1-201ENST00000252597 RETREG3Q86VR2 466 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 FBXO30Q8TB52 745 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 TBATAQ96M53 351 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 SPON2Q9BUD6 331 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 SLC39A8Q9C0K1 460 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 CCDC68Q9H2F9 335 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 EIF2B3Q9NR50 452 aaKnown RBP12□□□□□ -0.49
USHBP1-201ENST00000252597 TMEM30AQ9NV96 361 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 RAD54BQ9Y620 910 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 MAGEB16A2A368 324 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 E2F6O75461 281 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 ZNF189O75820 626 aaPredicted RBP11.99□□□□□ -0.49
USHBP1-201ENST00000252597 ALBP02768 609 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 HLA-DQB2P05538 268 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 LTA4HP09960 611 aaKnown RBP11.99□□□□□ -0.49
USHBP1-201ENST00000252597 CD247P20963 164 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 GRIK1P39086 918 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 BRCC3P46736 316 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 SLC26A2P50443 739 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 PMS2P3Q13401 168 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 LAPTM5Q13571 262 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 DGCR6Q14129 220 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 GALNT3Q14435 633 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 SQLEQ14534 574 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 GALNT18Q6P9A2 607 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 RAB44Q7Z6P3 723 aaPredicted RBP11.99□□□□□ -0.49
USHBP1-201ENST00000252597 CHERPQ8IWX8 916 aaKnown RBP11.99□□□□□ -0.49
USHBP1-201ENST00000252597 ARRDC4Q8NCT1 418 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 CENPIQ92674 756 aaPredicted RBP11.99□□□□□ -0.49
USHBP1-201ENST00000252597 NCLNQ969V3 563 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 SLCO4A1Q96BD0 722 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 C12orf42Q96LP6 360 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 CDK15Q96Q40 435 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 KCTD14Q9BQ13 255 aaPredicted RBP11.99□□□□□ -0.49
USHBP1-201ENST00000252597 ADARB2Q9NS39 739 aaKnown RBP11.99□□□□□ -0.49
USHBP1-201ENST00000252597 SLAMF8Q9P0V8 285 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 PAIP2BQ9ULR5 123 aaKnown RBP11.99□□□□□ -0.49
USHBP1-201ENST00000252597 AAR2Q9Y312 384 aaKnown RBP11.99□□□□□ -0.49
USHBP1-201ENST00000252597 SHROOM3Q8TF72 1996 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 EDNRBP24530 442 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 NUP107P57740 925 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 DSC2Q02487 901 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 DPYSQ14117 519 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 FRG1Q14331 258 aaKnown RBP11.99□□□□□ -0.49
USHBP1-201ENST00000252597 AARS2Q5JTZ9 985 aaKnown RBP11.99□□□□□ -0.49
USHBP1-201ENST00000252597 HECTD2Q5U5R9 776 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 OTUD1Q5VV17 481 aaPredicted RBP11.99□□□□□ -0.49
USHBP1-201ENST00000252597 CLEC14AQ86T13 490 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 LINC00523Q86TU6 105 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 CAMK1DQ8IU85 385 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 OSBPL6Q9BZF3 934 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 MUC3BQ9H195 1237 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 SP110Q9HB58 689 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 TIMMDC1Q9NPL8 285 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 PKD2L2Q9NZM6 624 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 NME4O00746 187 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 ENPP3O14638 875 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 TREHO43280 583 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 GMNNO75496 209 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 FYNP06241 537 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 SLC7A1P30825 629 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 CLCNKBP51801 687 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 KPNA1P52294 538 aaPredicted RBP11.99□□□□□ -0.49
USHBP1-201ENST00000252597 MERTKQ12866 999 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 NR1D2Q14995 579 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 DCAF4L1Q3SXM0 396 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 ERI1Q8IV48 349 aaKnown RBP11.99□□□□□ -0.49
USHBP1-201ENST00000252597 TMCO5AQ8N6Q1 288 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 EFHBQ8N7U6 833 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 BHMTQ93088 406 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 FCRL2Q96LA5 508 aaPredicted RBP11.99□□□□□ -0.49
USHBP1-201ENST00000252597 VRTNQ9H8Y1 702 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 FANCEQ9HB96 536 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 GLOD4Q9HC38 313 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.99□□□□□ -0.49
USHBP1-201ENST00000252597 MARCH4Q9P2E8 410 aaPredicted RBP11.99□□□□□ -0.49
USHBP1-201ENST00000252597 SUN2Q9UH99 717 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 IPO11Q9UI26 975 aaKnown RBP11.99□□□□□ -0.49
USHBP1-201ENST00000252597 TRHDEQ9UKU6 1024 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 ANKRD6Q9Y2G4 727 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 VWA7Q9Y334 891 aa11.99□□□□□ -0.49
USHBP1-201ENST00000252597 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.99□□□□□ -0.49
USHBP1-201ENST00000252597 DOCK1Q14185 1865 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 NOBOXO60393 691 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 ANXA9O76027 345 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 MYCP01106 439 aaPredicted RBP11.98□□□□□ -0.49
USHBP1-201ENST00000252597 IL7RP16871 459 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 ITGB6P18564 788 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 CDK9P50750 372 aaKnown RBP11.98□□□□□ -0.49
USHBP1-201ENST00000252597 DAOAP59103 153 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 PAFAH1B3Q15102 231 aaKnown RBP11.98□□□□□ -0.49
USHBP1-201ENST00000252597 KIAA0319Q5VV43 1072 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms