RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 ITGAXP20702 1163 aa25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 OGNP20774 298 aaKnown RBP25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 SCNN1BP51168 640 aa25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 CYTH1Q15438 398 aa25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 TAF12Q16514 161 aa25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 GPR158Q5T848 1215 aa25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 OR4L1Q8NH43 312 aa25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 ZNF385DQ9H6B1 395 aa25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 CATSPERZQ9NTU4 200 aa25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 MTF2Q9Y483 593 aaPredicted RBP25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 LRRC42Q9Y546 428 aa25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 TMEM233B4DJY2 109 aa25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 TBX10O75333 385 aa25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 PIK3R1P27986 724 aa25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 SLC34A1Q06495 639 aa25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 PEX6Q13608 980 aa25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 CUL3Q13618 768 aa25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 PDCD2Q16342 344 aaPredicted RBP25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 TRIM60Q495X7 471 aa25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 SH2D4BQ5SQS7 431 aa25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 SPOUT1Q5T280 376 aaKnown RBP25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 CNKSR3Q6P9H4 555 aa25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 CPSF7Q8N684 471 aaKnown RBP25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 ACTRT2Q8TDY3 377 aa25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 LENG8Q96PV6 779 aaPredicted RBP25.24■■□□□ 1.63
TMEM55B-201ENST00000250489 ZMPSTE24O75844 475 aa25.23■■□□□ 1.63
TMEM55B-201ENST00000250489 HNRNPLP14866 589 aaKnown RBP eCLIP25.23■■□□□ 1.63
TMEM55B-201ENST00000250489 HOXB8P17481 243 aaPredicted RBP25.23■■□□□ 1.63
TMEM55B-201ENST00000250489 ZNF140P52738 457 aaPredicted RBP25.23■■□□□ 1.63
TMEM55B-201ENST00000250489 SESN3P58005 492 aa25.23■■□□□ 1.63
TMEM55B-201ENST00000250489 BTKQ06187 659 aa25.23■■□□□ 1.63
TMEM55B-201ENST00000250489 C1orf146Q5VVC0 180 aa25.23■■□□□ 1.63
TMEM55B-201ENST00000250489 CXorf57Q6NSI4 855 aaKnown RBP25.23■■□□□ 1.63
TMEM55B-201ENST00000250489 C16orf59Q7L2K0 433 aa25.23■■□□□ 1.63
TMEM55B-201ENST00000250489 SLC39A11Q8N1S5 342 aa25.23■■□□□ 1.63
TMEM55B-201ENST00000250489 SHKBP1Q8TBC3 707 aa25.23■■□□□ 1.63
TMEM55B-201ENST00000250489 VWCEQ96DN2 955 aa25.23■■□□□ 1.63
TMEM55B-201ENST00000250489 CDKN2AIPNLQ96HQ2 116 aa25.23■■□□□ 1.63
TMEM55B-201ENST00000250489 LBHD1Q9BQE6 289 aaPredicted RBP25.23■■□□□ 1.63
TMEM55B-201ENST00000250489 RTKNQ9BST9 563 aa25.23■■□□□ 1.63
TMEM55B-201ENST00000250489 RNF208Q9H0X6 261 aa25.23■■□□□ 1.63
TMEM55B-201ENST00000250489 SCUBE2Q9NQ36 999 aa25.23■■□□□ 1.63
TMEM55B-201ENST00000250489 NLE1Q9NVX2 485 aaPredicted RBP25.23■■□□□ 1.63
TMEM55B-201ENST00000250489 ARHGAP26Q9UNA1 814 aa25.23■■□□□ 1.63
TMEM55B-201ENST00000250489 CBX4O00257 560 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 CRTAMO95727 393 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 SLC4A1P02730 911 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 TIAL1Q01085 375 aaKnown RBP eCLIP25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 VEPH1Q14D04 833 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 TAF11Q15544 211 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 RNF219Q5W0B1 726 aaPredicted RBP25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 PGM2L1Q6PCE3 622 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 MYLK4Q86YV6 388 aaPredicted RBP25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 DTX3LQ8TDB6 740 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 HERC2P3Q9BVR0 1158 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 TDRD1Q9BXT4 1180 aaKnown RBP25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 GTSE1Q9NYZ3 720 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 ARIH1Q9Y4X5 557 aaPredicted RBP25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 SLC22A2O15244 555 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 CCNT2O60583 730 aaKnown RBP25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 PRLP01236 227 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 CCL5P13501 91 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 SUOXP51687 545 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 STC1P52823 247 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 SULT2A1Q06520 285 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 TYSND1Q2T9J0 566 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 ISCA2Q86U28 154 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 SLC22A9Q8IVM8 553 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 GIMAP7Q8NHV1 300 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 RMDN1Q96DB5 314 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 MAELQ96JY0 434 aaKnown RBP25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 ZNF558Q96NG5 402 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 TOX2Q96NM4 488 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 DDX50Q9BQ39 737 aaKnown RBP25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 ALG9Q9H6U8 611 aa25.22■■□□□ 1.63
TMEM55B-201ENST00000250489 TRPC5OSA6NMA1 111 aa25.21■■□□□ 1.63
TMEM55B-201ENST00000250489 F11P03951 625 aa25.21■■□□□ 1.63
TMEM55B-201ENST00000250489 SP100P23497 879 aaPredicted RBP25.21■■□□□ 1.63
TMEM55B-201ENST00000250489 PPARGP37231 505 aaPredicted RBP25.21■■□□□ 1.63
TMEM55B-201ENST00000250489 PPP3CCP48454 512 aa25.21■■□□□ 1.63
TMEM55B-201ENST00000250489 PLK1P53350 603 aa25.21■■□□□ 1.63
TMEM55B-201ENST00000250489 SDCCAG8Q86SQ7 713 aaPredicted RBP25.21■■□□□ 1.63
TMEM55B-201ENST00000250489 NRG4Q8WWG1 115 aa25.21■■□□□ 1.63
TMEM55B-201ENST00000250489 TMEM169Q96HH4 297 aa25.21■■□□□ 1.63
TMEM55B-201ENST00000250489 MUC3BQ9H195 1237 aa25.21■■□□□ 1.63
TMEM55B-201ENST00000250489 SAGE1Q9NXZ1 904 aa25.21■■□□□ 1.63
TMEM55B-201ENST00000250489 STOML2Q9UJZ1 356 aa25.21■■□□□ 1.63
TMEM55B-201ENST00000250489 THRAP10827 490 aa25.2■■□□□ 1.63
TMEM55B-201ENST00000250489 CD1EP15812 388 aa25.2■■□□□ 1.63
TMEM55B-201ENST00000250489 CES1P23141 567 aa25.2■■□□□ 1.63
TMEM55B-201ENST00000250489 VHLP40337 213 aa25.2■■□□□ 1.63
TMEM55B-201ENST00000250489 KCNC1P48547 511 aa25.2■■□□□ 1.63
TMEM55B-201ENST00000250489 ARF5P84085 180 aa25.2■■□□□ 1.63
TMEM55B-201ENST00000250489 TWF1Q12792 350 aa25.2■■□□□ 1.63
TMEM55B-201ENST00000250489 RAB33AQ14088 237 aa25.2■■□□□ 1.63
TMEM55B-201ENST00000250489 TMEM198Q66K66 360 aa25.2■■□□□ 1.63
TMEM55B-201ENST00000250489 NXNQ6DKJ4 435 aa25.2■■□□□ 1.63
TMEM55B-201ENST00000250489 DEFB107AQ8IZN7 70 aa25.2■■□□□ 1.63
TMEM55B-201ENST00000250489 POPDC3Q9HBV1 291 aa25.2■■□□□ 1.63
TMEM55B-201ENST00000250489 SMPD4Q9NXE4 827 aa25.2■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms