RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 NR6A1Q15406 480 aa13.39□□□□□ -0.27
PEX1-201ENST00000248633 ESRP1Q6NXG1 681 aaKnown RBP13.39□□□□□ -0.27
PEX1-201ENST00000248633 POTEHQ6S545 545 aa13.39□□□□□ -0.27
PEX1-201ENST00000248633 SPESP1Q6UW49 350 aa13.39□□□□□ -0.27
PEX1-201ENST00000248633 TTC30AQ86WT1 665 aa13.39□□□□□ -0.27
PEX1-201ENST00000248633 RALGPS2Q86X27 583 aaPredicted RBP13.39□□□□□ -0.27
PEX1-201ENST00000248633 HPS1Q92902 700 aa13.39□□□□□ -0.27
PEX1-201ENST00000248633 WDR83Q9BRX9 315 aaKnown RBP13.39□□□□□ -0.27
PEX1-201ENST00000248633 COLEC11Q9BWP8 271 aa13.39□□□□□ -0.27
PEX1-201ENST00000248633 FTHL17Q9BXU8 183 aa13.39□□□□□ -0.27
PEX1-201ENST00000248633 C6orf62Q9GZU0 229 aaPredicted RBP13.39□□□□□ -0.27
PEX1-201ENST00000248633 SCHIP1Q9P0W5 487 aaPredicted RBP13.39□□□□□ -0.27
PEX1-201ENST00000248633 GIMAP2Q9UG22 337 aa13.39□□□□□ -0.27
PEX1-201ENST00000248633 COQ6Q9Y2Z9 468 aa13.39□□□□□ -0.27
PEX1-201ENST00000248633 MTF2Q9Y483 593 aaPredicted RBP13.39□□□□□ -0.27
PEX1-201ENST00000248633 TRAF6Q9Y4K3 522 aa13.39□□□□□ -0.27
PEX1-201ENST00000248633 A0A0J9YVX5 310 aa13.39□□□□□ -0.27
PEX1-201ENST00000248633 CBFA2T3O75081 653 aa13.39□□□□□ -0.27
PEX1-201ENST00000248633 KCNH1O95259 989 aa13.39□□□□□ -0.27
PEX1-201ENST00000248633 ZNF682O95780 498 aa13.39□□□□□ -0.27
PEX1-201ENST00000248633 VAC14Q08AM6 782 aa13.39□□□□□ -0.27
PEX1-201ENST00000248633 EPGNQ6UW88 154 aa13.39□□□□□ -0.27
PEX1-201ENST00000248633 MILR1Q7Z6M3 343 aa13.39□□□□□ -0.27
PEX1-201ENST00000248633 BORCS5Q969J3 196 aa13.39□□□□□ -0.27
PEX1-201ENST00000248633 ADI1Q9BV57 179 aa13.39□□□□□ -0.27
PEX1-201ENST00000248633 RAD54BQ9Y620 910 aa13.39□□□□□ -0.27
PEX1-201ENST00000248633 CCDC154A6NI56 674 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 MATKP42679 507 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 ALDH7A1P49419 539 aaKnown RBP13.38□□□□□ -0.27
PEX1-201ENST00000248633 MS4A2Q01362 244 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 DMC1Q14565 340 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 ZNF280DQ6N043 979 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 OGFOD2Q6N063 350 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 TMEM214Q6NUQ4 689 aaKnown RBP13.38□□□□□ -0.27
PEX1-201ENST00000248633 NAPRTQ6XQN6 538 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 FAM126BQ8IXS8 530 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 ANKRD52Q8NB46 1076 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 RNF186Q9NXI6 227 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 CACNG4Q9UBN1 327 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.38□□□□□ -0.27
PEX1-201ENST00000248633 KPNA4O00629 521 aaPredicted RBP13.38□□□□□ -0.27
PEX1-201ENST00000248633 SYNCRIPO60506 623 aaKnown RBP13.38□□□□□ -0.27
PEX1-201ENST00000248633 ENDOD1O94919 500 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 BRCC3P46736 316 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 CCL23P55773 120 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 UBE3AQ05086 875 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 SLC10A2Q12908 348 aaPredicted RBP13.38□□□□□ -0.27
PEX1-201ENST00000248633 MSLNQ13421 630 aaPredicted RBP13.38□□□□□ -0.27
PEX1-201ENST00000248633 TRIM60Q495X7 471 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 CTXN3Q4LDR2 81 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 TEX44Q53QW1 395 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 TMEM86AQ8N2M4 240 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 OR2T34Q8NGX1 318 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 OR2T3Q8NH03 318 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 ELMO1Q92556 727 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 TRIM62Q9BVG3 475 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 ADAMTS10Q9H324 1103 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 RAD21L1Q9H4I0 556 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 ABCB10Q9NRK6 738 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 TIMM22Q9Y584 194 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 EI24O14681 340 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 ALDH2P05091 517 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 UGT1A1P22309 533 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 UGT1A4P22310 534 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 BDNFP23560 247 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 LMO2P25791 158 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 NOS2P35228 1153 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 UGT1A3P35503 534 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 UGT1A5P35504 534 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 TAS2R39P59534 338 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 LILRA4P59901 499 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 CCDC85BQ15834 202 aaPredicted RBP13.38□□□□□ -0.27
PEX1-201ENST00000248633 ZYG11AQ6WRX3 759 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 NANOGNBQ7Z5D8 188 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 ZDHHC13Q8IUH4 622 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 ZDHHC17Q8IUH5 632 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 TP53INP2Q8IXH6 220 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 SLAIN1Q8ND83 568 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 ITFG1Q8TB96 612 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 CAPSLQ8WWF8 208 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 TMEM106CQ9BVX2 250 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 UNC93B1Q9H1C4 597 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 FANCEQ9HB96 536 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 FBRSL1Q9HCM7 1045 aaKnown RBP13.38□□□□□ -0.27
PEX1-201ENST00000248633 LATS2Q9NRM7 1088 aa13.38□□□□□ -0.27
PEX1-201ENST00000248633 CNOT6Q9ULM6 557 aaKnown RBP13.38□□□□□ -0.27
PEX1-201ENST00000248633 TRIM43BA6NCK2 446 aa13.37□□□□□ -0.27
PEX1-201ENST00000248633 MDM4O15151 490 aa13.37□□□□□ -0.27
PEX1-201ENST00000248633 APOA1P02647 267 aa13.37□□□□□ -0.27
PEX1-201ENST00000248633 LTA4HP09960 611 aaKnown RBP13.37□□□□□ -0.27
PEX1-201ENST00000248633 HSMCR30P0CW71 290 aa13.37□□□□□ -0.27
PEX1-201ENST00000248633 MLNP12872 115 aa13.37□□□□□ -0.27
PEX1-201ENST00000248633 JAK1P23458 1154 aa13.37□□□□□ -0.27
PEX1-201ENST00000248633 SFSWAPQ12872 951 aaKnown RBP13.37□□□□□ -0.27
PEX1-201ENST00000248633 ZRANB3Q5FWF4 1079 aa13.37□□□□□ -0.27
PEX1-201ENST00000248633 KLHL35Q6PF15 583 aa13.37□□□□□ -0.27
PEX1-201ENST00000248633 KCTD8Q6ZWB6 473 aa13.37□□□□□ -0.27
PEX1-201ENST00000248633 CTU1Q7Z7A3 348 aaKnown RBP13.37□□□□□ -0.27
PEX1-201ENST00000248633 PNPLA1Q8N8W4 532 aa13.37□□□□□ -0.27
PEX1-201ENST00000248633 C12orf43Q96C57 262 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms