RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 ZC3HC1Q86WB0 502 aaKnown RBP18.78■□□□□ 0.6
TNFSF9-201ENST00000245817 OR4K2Q8NGD2 314 aa18.78■□□□□ 0.6
TNFSF9-201ENST00000245817 DENND1AQ8TEH3 1009 aa18.78■□□□□ 0.6
TNFSF9-201ENST00000245817 PIH1D2Q8WWB5 315 aa18.78■□□□□ 0.6
TNFSF9-201ENST00000245817 SORCS1Q8WY21 1168 aa18.78■□□□□ 0.6
TNFSF9-201ENST00000245817 CABS1Q96KC9 395 aa18.78■□□□□ 0.6
TNFSF9-201ENST00000245817 ZNF641Q96N77 438 aaPredicted RBP18.78■□□□□ 0.6
TNFSF9-201ENST00000245817 NECTIN4Q96NY8 510 aa18.78■□□□□ 0.6
TNFSF9-201ENST00000245817 HPS4Q9NQG7 708 aa18.78■□□□□ 0.6
TNFSF9-201ENST00000245817 GGT7Q9UJ14 662 aa18.78■□□□□ 0.6
TNFSF9-201ENST00000245817 MTO1Q9Y2Z2 717 aaKnown RBP18.78■□□□□ 0.6
TNFSF9-201ENST00000245817 GMNCA6NCL1 334 aa18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 CCL22O00626 93 aa18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 GOT2P00505 430 aaKnown RBP18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 CTPS1P17812 591 aa18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 CCNFP41002 786 aa18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 SLC6A11P48066 632 aa18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 POLD2P49005 469 aa18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 ARSDP51689 593 aa18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 ZNF140P52738 457 aaPredicted RBP18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 LVRNQ6Q4G3 990 aa18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 MTSS1LQ765P7 747 aa18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 OR4L1Q8NH43 312 aa18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 PPM1EQ8WY54 764 aa18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 CDKN2AIPNLQ96HQ2 116 aa18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 HEPHQ9BQS7 1158 aa18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 TRMT61BQ9BVS5 477 aaKnown RBP18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 POMKQ9H5K3 350 aa18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 MKS1Q9NXB0 559 aa18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 PHTF1Q9UMS5 762 aa18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 ZNF711Q9Y462 761 aa18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 REV3LO60673 3130 aa18.77■□□□□ 0.6
TNFSF9-201ENST00000245817 OTOL1A6NHN0 477 aaPredicted RBP18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 TTC34A8MYJ7 566 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 AURKAO14965 403 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 ECI2O75521 394 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 ALDOAP04075 364 aaKnown RBP18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 MPOP05164 745 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 PMLP29590 882 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 GDI1P31150 447 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 POLR2LP62875 67 aaKnown RBP18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 MPP1Q00013 466 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 KDSRQ06136 332 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 PTPRCAPQ14761 206 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 EIF4HQ15056 248 aaKnown RBP18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 FASTKD1Q53R41 847 aaKnown RBP18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 AFTPHQ6ULP2 937 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 PARM1Q6UWI2 310 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 NUDT18Q6ZVK8 323 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 CILP2Q8IUL8 1156 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 UCMAQ8WVF2 138 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 MRGPRX3Q96LB0 322 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 GPR22Q99680 433 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 PLA2G2FQ9BZM2 168 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 SUDS3Q9H7L9 328 aaPredicted RBP18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 SNX15Q9NRS6 342 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 CATSPERZQ9NTU4 200 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 DCDC2Q9UHG0 476 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 SLC39A10Q9ULF5 831 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 EYSQ5T1H1 3165 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 A0A0J9YYE9 177 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 CCDC162PA2VCL2 907 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 TBC1D3BA6NDS4 549 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 WASH3PC4AMC7 463 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 CD3EAPO15446 510 aaKnown RBP18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 ASMTLO95671 621 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 TRBC1P01850 177 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 CRHR1P34998 444 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 ABCG1P45844 678 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 NEK3P51956 506 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 SLC12A2P55011 1212 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 USP10Q14694 798 aaKnown RBP18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 SKIV2LQ15477 1246 aaKnown RBP18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 GDPD4Q6W3E5 623 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 RAPH1Q70E73 1250 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 USP45Q70EL2 814 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 GALNT7Q86SF2 657 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 OR2A12Q8NGT7 310 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 TTC8Q8TAM2 541 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 BCAS4Q8TDM0 211 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 CKAP2Q8WWK9 683 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 CHMP6Q96FZ7 201 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 MSLNLQ96KJ4 702 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 VPS11Q9H270 941 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 CCDC134Q9H6E4 229 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 ZFYVE1Q9HBF4 777 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 FBXO6Q9NRD1 293 aaPredicted RBP18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 TLK1Q9UKI8 766 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 GRID1Q9ULK0 1009 aa18.76■□□□□ 0.59
TNFSF9-201ENST00000245817 OR51F1A6NGY5 319 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 PFDN6O15212 129 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 GLRA3O75311 464 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 HAUS5O94927 633 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 UGT2B4P06133 528 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 F7P08709 466 aaPredicted RBP18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 ALPIP09923 528 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 SAT1P21673 171 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 NFKBIAP25963 317 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 LEPRP48357 1165 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms