RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 ZNF71Q9NQZ8 489 aaPredicted RBP13.89□□□□□ -0.19
DDX39A-201ENST00000242776 NOCTQ9UK39 431 aaKnown RBP13.89□□□□□ -0.19
DDX39A-201ENST00000242776 RELNP78509 3460 aa13.89□□□□□ -0.19
DDX39A-201ENST00000242776 FAM72CH0Y354 149 aa13.88□□□□□ -0.19
DDX39A-201ENST00000242776 SKILP12757 684 aa13.88□□□□□ -0.19
DDX39A-201ENST00000242776 FECHP22830 423 aa13.88□□□□□ -0.19
DDX39A-201ENST00000242776 CYLC1P35663 651 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-201ENST00000242776 MAZP56270 477 aaKnown RBP13.88□□□□□ -0.19
DDX39A-201ENST00000242776 POLE2P56282 527 aa13.88□□□□□ -0.19
DDX39A-201ENST00000242776 OR1D5P58170 312 aa13.88□□□□□ -0.19
DDX39A-201ENST00000242776 RHOAP61586 193 aa13.88□□□□□ -0.19
DDX39A-201ENST00000242776 ZFP36L1Q07352 338 aaKnown RBP13.88□□□□□ -0.19
DDX39A-201ENST00000242776 KCNAB2Q13303 367 aa13.88□□□□□ -0.19
DDX39A-201ENST00000242776 C15orf59Q2T9L4 293 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-201ENST00000242776 FAM72AQ5TYM5 149 aa13.88□□□□□ -0.19
DDX39A-201ENST00000242776 FAM72DQ6L9T8 149 aa13.88□□□□□ -0.19
DDX39A-201ENST00000242776 PPP1R2P3Q6NXS1 205 aa13.88□□□□□ -0.19
DDX39A-201ENST00000242776 BORAQ6PGQ7 559 aa13.88□□□□□ -0.19
DDX39A-201ENST00000242776 FAM72BQ86X60 149 aa13.88□□□□□ -0.19
DDX39A-201ENST00000242776 DTX1Q86Y01 620 aa13.88□□□□□ -0.19
DDX39A-201ENST00000242776 ZDHHC17Q8IUH5 632 aa13.88□□□□□ -0.19
DDX39A-201ENST00000242776 TMEM35BQ8NCS4 154 aa13.88□□□□□ -0.19
DDX39A-201ENST00000242776 ZNF564Q8TBZ8 553 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-201ENST00000242776 SLC20A1Q8WUM9 679 aa13.88□□□□□ -0.19
DDX39A-201ENST00000242776 CCDC42Q96M95 316 aa13.88□□□□□ -0.19
DDX39A-201ENST00000242776 WDR92Q96MX6 357 aa13.88□□□□□ -0.19
DDX39A-201ENST00000242776 KLC2Q9H0B6 622 aa13.88□□□□□ -0.19
DDX39A-201ENST00000242776 METTL5Q9NRN9 209 aaKnown RBP13.88□□□□□ -0.19
DDX39A-201ENST00000242776 OR12D3Q9UGF7 316 aa13.88□□□□□ -0.19
DDX39A-201ENST00000242776 TMEM202A6NGA9 273 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 TMEM110-MUSTN1A8MSY1 372 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 RAMP2O60895 175 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 LSM8O95777 96 aaKnown RBP13.87□□□□□ -0.19
DDX39A-201ENST00000242776 IGSF6O95976 241 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 MMEP08473 750 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 GLB1P16278 677 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 ALDH4A1P30038 563 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 PEX5P50542 639 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 GEMIN4P57678 1058 aaKnown RBP13.87□□□□□ -0.19
DDX39A-201ENST00000242776 FMO1Q01740 532 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 RAD51Q06609 339 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 C14orf28Q4W4Y0 310 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 CERCAMQ5T4B2 595 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 TMEM164Q5U3C3 297 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 HIST2H2BCQ6DN03 193 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 ZNF571Q7Z3V5 609 aaPredicted RBP13.87□□□□□ -0.19
DDX39A-201ENST00000242776 SLITRK4Q8IW52 837 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 LRRC8AQ8IWT6 810 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 PLPP6Q8IY26 295 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 CCDC170Q8IYT3 715 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 IL22RA1Q8N6P7 574 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 MSANTD4Q8NCY6 345 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 OR6C4Q8NGE1 309 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 SLC12A9Q9BXP2 914 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 TMEM168Q9H0V1 697 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 NHEJ1Q9H9Q4 299 aaPredicted RBP13.87□□□□□ -0.19
DDX39A-201ENST00000242776 PCDH12Q9NPG4 1184 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 PPARGC1AQ9UBK2 798 aaKnown RBP13.87□□□□□ -0.19
DDX39A-201ENST00000242776 TOR1BO14657 336 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 AKR1B10O60218 316 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 IPO7O95373 1038 aaKnown RBP13.87□□□□□ -0.19
DDX39A-201ENST00000242776 NTRK1P04629 796 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 GP1BBP13224 206 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 LIFP15018 202 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 MPSTP25325 297 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 ETFBP38117 255 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 LIG3P49916 1009 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 TMEM52BQ4KMG9 183 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 NLRP14Q86W24 1093 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 CPA5Q8WXQ8 436 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 HMCESQ96FZ2 354 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 RBM15Q96T37 977 aaKnown RBP eCLIP13.87□□□□□ -0.193e-8■■■■■ 30.9
DDX39A-201ENST00000242776 NUDT22Q9BRQ3 303 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 CYP4F12Q9HCS2 524 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 FGF22Q9HCT0 170 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 AKAP7Q9P0M2 348 aaPredicted RBP13.87□□□□□ -0.19
DDX39A-201ENST00000242776 APPL1Q9UKG1 709 aa13.87□□□□□ -0.19
DDX39A-201ENST00000242776 UTP20O75691 2785 aaKnown RBP13.86□□□□□ -0.19
DDX39A-201ENST00000242776 A8MX80 341 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 STMND1H3BQB6 276 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 B4GAT1O43505 415 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 KDELR3O43731 214 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 LRIG2O94898 1065 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 PLEKP08567 350 aaPredicted RBP13.86□□□□□ -0.19
DDX39A-201ENST00000242776 PRKAR1AP10644 381 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 RHOQP17081 205 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 MAPKAPK2P49137 400 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 PPM1FP49593 454 aaPredicted RBP13.86□□□□□ -0.19
DDX39A-201ENST00000242776 ATP1A2P50993 1020 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 ELP6Q0PNE2 266 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 CFAP58Q5T655 872 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 ACBD5Q5T8D3 534 aaPredicted RBP13.86□□□□□ -0.19
DDX39A-201ENST00000242776 PIM3Q86V86 326 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 PAF1Q8N7H5 531 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 OR56A4Q8NGH8 313 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 ATL2Q8NHH9 583 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 NKD1Q969G9 470 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 FUBP1Q96AE4 644 aaKnown RBP13.86□□□□□ -0.19
DDX39A-201ENST00000242776 TMEM159Q96B96 161 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 TBC1D31Q96DN5 1066 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms