RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 SKA1Q96BD8 255 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 TBC1D31Q96DN5 1066 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 STAMBPL1Q96FJ0 436 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 CFAP36Q96G28 342 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 TNIP3Q96KP6 325 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 ZMAT2Q96NC0 199 aaKnown RBP8.02□□□□□ -1.13
CXCR4-201ENST00000241393 OLFM3Q96PB7 478 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 CSPG4P5Q96PW8 444 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 FAM111AQ96PZ2 611 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 SIKE1Q9BRV8 207 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 TBC1D10AQ9BXI6 508 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 RAB6CQ9H0N0 254 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 MMADHCQ9H3L0 296 aaPredicted RBP8.02□□□□□ -1.13
CXCR4-201ENST00000241393 RNPEPL1Q9HAU8 725 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 PLAC1Q9HBJ0 212 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 BATF3Q9NR55 127 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 MTMR10Q9NXD2 777 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.02□□□□□ -1.13
CXCR4-201ENST00000241393 HAO1Q9UJM8 370 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 PLXNB2O15031 1838 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 I3L4J1 428 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 GOLGA8RI6L899 631 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 XPO1O14980 1071 aaKnown RBP8.01□□□□□ -1.13
CXCR4-201ENST00000241393 NRP2O60462 931 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 OPHN1O60890 802 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 DAB1O75553 588 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 RFPL1O75677 317 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 ALDH1A2O94788 518 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 NEFHP12036 1026 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 CALB2P22676 271 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 XPAP23025 273 aaPredicted RBP8.01□□□□□ -1.13
CXCR4-201ENST00000241393 IGFBP6P24592 240 aaPredicted RBP8.01□□□□□ -1.13
CXCR4-201ENST00000241393 MC4RP32245 332 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 MATKP42679 507 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 RECQLP46063 649 aaPredicted RBP8.01□□□□□ -1.13
CXCR4-201ENST00000241393 SLC5A3P53794 718 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 AIF1P55008 147 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 ITGA1P56199 1179 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 GRB14Q14449 540 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 TBCCQ15814 346 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 SLC25A52Q3SY17 297 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 PPP6R3Q5H9R7 873 aaPredicted RBP8.01□□□□□ -1.13
CXCR4-201ENST00000241393 KYAT3Q6YP21 454 aaKnown RBP8.01□□□□□ -1.13
CXCR4-201ENST00000241393 ZNF534Q76KX8 674 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 MARK2Q7KZI7 788 aaKnown RBP8.01□□□□□ -1.13
CXCR4-201ENST00000241393 ANKRD23Q86SG2 305 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 PRPF39Q86UA1 669 aaKnown RBP8.01□□□□□ -1.13
CXCR4-201ENST00000241393 MAB21L3Q8N8X9 362 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 OR6J1Q8NGC5 347 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 RFWD2Q8NHY2 731 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 CCDC110Q8TBZ0 833 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 TFB1MQ8WVM0 346 aaKnown RBP8.01□□□□□ -1.13
CXCR4-201ENST00000241393 KBTBD7Q8WVZ9 684 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 NSL1Q96IY1 281 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 PAWRQ96IZ0 340 aaKnown RBP8.01□□□□□ -1.13
CXCR4-201ENST00000241393 SPATA13Q96N96 652 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 SNX25Q9H3E2 840 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 DHX35Q9H5Z1 703 aaKnown RBP8.01□□□□□ -1.13
CXCR4-201ENST00000241393 FAM49BQ9NUQ9 324 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 GPATCH2LQ9NWQ4 482 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 MOCS1Q9NZB8 636 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 KCMF1Q9P0J7 381 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 RNF181Q9P0P0 153 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 TUBGCP4Q9UGJ1 667 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 NME7Q9Y5B8 376 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 RAD54BQ9Y620 910 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 NUMBLQ9Y6R0 609 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 PMF1-BGLAPU3KQ54 211 aa8.01□□□□□ -1.13
CXCR4-201ENST00000241393 SCN1AP35498 2009 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 WDR91A4D1P6 747 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 KPNA7A9QM74 516 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 AVILO75366 819 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 RECQL4O94761 1208 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 CBX6O95503 412 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 METTL18O95568 372 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 GLDCP23378 1020 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 WARSP23381 471 aaKnown RBP8□□□□□ -1.13
CXCR4-201ENST00000241393 GNL1P36915 607 aaPredicted RBP8□□□□□ -1.13
CXCR4-201ENST00000241393 GLUD2P49448 558 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 TAF6P49848 677 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 MANFP55145 182 aaKnown RBP8□□□□□ -1.13
CXCR4-201ENST00000241393 GBE1Q04446 702 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 FRG1Q14331 258 aaKnown RBP8□□□□□ -1.13
CXCR4-201ENST00000241393 INAVAQ3KP66 663 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 ANKRD20A3Q5VUR7 823 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 NCBP2-AS2Q69YL0 99 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 LRRC8BQ6P9F7 803 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 BNIPLQ7Z465 357 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 LONP2Q86WA8 852 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 ARHGAP24Q8N264 748 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 C1orf162Q8NEQ5 155 aaPredicted RBP8□□□□□ -1.13
CXCR4-201ENST00000241393 NSMCE1Q8WV22 266 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 HTR3CQ8WXA8 447 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 CDKL2Q92772 493 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 NT5C3BQ969T7 300 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 PTCD3Q96EY7 689 aaKnown RBP8□□□□□ -1.13
CXCR4-201ENST00000241393 THOC1Q96FV9 657 aaKnown RBP8□□□□□ -1.13
CXCR4-201ENST00000241393 KLF6Q99612 283 aaPredicted RBP8□□□□□ -1.13
CXCR4-201ENST00000241393 HNRNPABQ99729 332 aaKnown RBP8□□□□□ -1.13
CXCR4-201ENST00000241393 BTBD10Q9BSF8 475 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms