RNA–Protein interactions for RNA: ENST00000239849.8

TNFSF11-201, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-201ENST00000239849 GGCXP38435 758 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 GARSP41250 739 aaKnown RBP12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 ZRSR2Q15696 482 aaKnown RBP12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 LRRC73Q5JTD7 316 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 SNAP47Q5SQN1 464 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 TCERG1LQ5VWI1 586 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 RESP18Q5W5W9 173 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 SLC6A19Q695T7 634 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 CYB5D1Q6P9G0 228 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 GRAMD1CQ8IYS0 662 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 GUF1Q8N442 669 aaKnown RBP12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 Q8NA96 180 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 CCL4L1Q8NHW4 92 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 HDAC11Q96DB2 347 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 HMCESQ96FZ2 354 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 GDAP1L1Q96MZ0 367 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 SLC38A3Q99624 504 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 ZSWIM1Q9BR11 485 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 TRIM55Q9BYV6 548 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 WDR26Q9H7D7 661 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 CARS2Q9HA77 564 aaKnown RBP12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 APMAPQ9HDC9 416 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 LATS2Q9NRM7 1088 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 ARHGEF38Q9NXL2 777 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 SERTAD1Q9UHV2 236 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 CFAP45Q9UL16 551 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 COQ6Q9Y2Z9 468 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 CELSR1Q9NYQ6 3014 aa12.95□□□□□ -0.34
TNFSF11-201ENST00000239849 CSMD2Q7Z408 3487 aa12.94□□□□□ -0.34
TNFSF11-201ENST00000239849 IGLV3-10A0A075B6K4 115 aa12.94□□□□□ -0.34
TNFSF11-201ENST00000239849 A8MU76 341 aa12.94□□□□□ -0.34
TNFSF11-201ENST00000239849 PPM1DO15297 605 aa12.94□□□□□ -0.34
TNFSF11-201ENST00000239849 ITGA1P56199 1179 aa12.94□□□□□ -0.34
TNFSF11-201ENST00000239849 GRM3Q14832 879 aa12.94□□□□□ -0.34
TNFSF11-201ENST00000239849 UGT8Q16880 541 aa12.94□□□□□ -0.34
TNFSF11-201ENST00000239849 TMEM135Q86UB9 458 aa12.94□□□□□ -0.34
TNFSF11-201ENST00000239849 CASKIN2Q8WXE0 1202 aa12.94□□□□□ -0.34
TNFSF11-201ENST00000239849 PAGE5Q96GU1 130 aa12.94□□□□□ -0.34
TNFSF11-201ENST00000239849 NT5C1BQ96P26 610 aa12.94□□□□□ -0.34
TNFSF11-201ENST00000239849 ZYG11BQ9C0D3 744 aa12.94□□□□□ -0.34
TNFSF11-201ENST00000239849 TKTL2Q9H0I9 626 aa12.94□□□□□ -0.34
TNFSF11-201ENST00000239849 ING2Q9H160 280 aa12.94□□□□□ -0.34
TNFSF11-201ENST00000239849 STN1Q9H668 368 aaKnown RBP12.94□□□□□ -0.34
TNFSF11-201ENST00000239849 RETREG1Q9H6L5 497 aa12.94□□□□□ -0.34
TNFSF11-201ENST00000239849 MPP6Q9NZW5 540 aa12.94□□□□□ -0.34
TNFSF11-201ENST00000239849 USP25Q9UHP3 1055 aa12.94□□□□□ -0.34
TNFSF11-201ENST00000239849 PADI1Q9ULC6 663 aa12.94□□□□□ -0.34
TNFSF11-201ENST00000239849 HIVEP1P15822 2718 aa12.94□□□□□ -0.34
TNFSF11-201ENST00000239849 CETN3O15182 167 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 IGSF6O95976 241 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 F9P00740 461 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 ERCC5P28715 1186 aaPredicted RBP12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 TRIM23P36406 574 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 FASLGP48023 281 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 LIG3P49916 1009 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 CCL11P51671 97 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 NDST2P52849 883 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 HDAC4P56524 1084 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 SNX16P57768 344 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 DNM1Q05193 864 aaKnown RBP12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 LRMPQ12912 555 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 DNASE1L3Q13609 305 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 IL11RAQ14626 422 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 CBWD6Q4V339 395 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 DCAF17Q5H9S7 520 aaPredicted RBP12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 CBWD3Q5JTY5 395 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 CBWD5Q5RIA9 395 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 CFAP58Q5T655 872 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 KCTD16Q68DU8 428 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 NYAP1Q6ZVC0 841 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 ZNF683Q8IZ20 524 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 NAGSQ8N159 534 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 SNRNP40Q96DI7 357 aaKnown RBP12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 GPR87Q9BY21 358 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 TTYH3Q9C0H2 523 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 EPB41L1Q9H4G0 881 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 PCDHA7Q9UN72 937 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 MFHAS1Q9Y4C4 1052 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 LRP4O75096 1905 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 ABCA2Q9BZC7 2435 aa12.93□□□□□ -0.34
TNFSF11-201ENST00000239849 ZSCAN5CA6NGD5 496 aaPredicted RBP12.92□□□□□ -0.34
TNFSF11-201ENST00000239849 ANKRD34CP0C6C1 535 aa12.92□□□□□ -0.34
TNFSF11-201ENST00000239849 FOXM1Q08050 763 aa12.92□□□□□ -0.34
TNFSF11-201ENST00000239849 TAF5Q15542 800 aa12.92□□□□□ -0.34
TNFSF11-201ENST00000239849 UGP2Q16851 508 aa12.92□□□□□ -0.34
TNFSF11-201ENST00000239849 FOXD4L6Q3SYB3 417 aaPredicted RBP12.92□□□□□ -0.34
TNFSF11-201ENST00000239849 ANKRD40Q6AI12 368 aa12.92□□□□□ -0.34
TNFSF11-201ENST00000239849 ATL3Q6DD88 541 aa12.92□□□□□ -0.34
TNFSF11-201ENST00000239849 SLC30A9Q6PML9 568 aa12.92□□□□□ -0.34
TNFSF11-201ENST00000239849 FOXD4L3Q6VB84 417 aaPredicted RBP12.92□□□□□ -0.34
TNFSF11-201ENST00000239849 NRROSQ86YC3 692 aa12.92□□□□□ -0.34
TNFSF11-201ENST00000239849 PPM1KQ8N3J5 372 aa12.92□□□□□ -0.34
TNFSF11-201ENST00000239849 GALNT6Q8NCL4 622 aa12.92□□□□□ -0.34
TNFSF11-201ENST00000239849 SH3KBP1Q96B97 665 aa12.92□□□□□ -0.34
TNFSF11-201ENST00000239849 NCAPGQ9BPX3 1015 aa12.92□□□□□ -0.34
TNFSF11-201ENST00000239849 AGPAT4Q9NRZ5 378 aa12.92□□□□□ -0.34
TNFSF11-201ENST00000239849 ASF1BQ9NVP2 202 aa12.92□□□□□ -0.34
TNFSF11-201ENST00000239849 LUZP4Q9P127 313 aa12.92□□□□□ -0.34
TNFSF11-201ENST00000239849 STAP1Q9ULZ2 295 aa12.92□□□□□ -0.34
TNFSF11-201ENST00000239849 SHANK1Q9Y566 2161 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms