RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 SNX13Q9Y5W8 968 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 AP4B1Q9Y6B7 739 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 UNC80Q8N2C7 3258 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 MYLKQ15746 1914 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 FAM149AA5PLN7 773 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 ENPP3O14638 875 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 HOXD11P31277 338 aaPredicted RBP9.17□□□□□ -0.94
SYDE2-201ENST00000234668 CASP2P42575 452 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 PRKCZQ05513 592 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 DUSP4Q13115 394 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 HNRNPDQ14103 355 aaKnown RBP9.17□□□□□ -0.94
SYDE2-201ENST00000234668 FRG1Q14331 258 aaKnown RBP9.17□□□□□ -0.94
SYDE2-201ENST00000234668 OR4D1Q15615 310 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 CTXN3Q4LDR2 81 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 VARS2Q5ST30 1063 aaKnown RBP9.17□□□□□ -0.94
SYDE2-201ENST00000234668 OGFRL1Q5TC84 451 aaPredicted RBP9.17□□□□□ -0.94
SYDE2-201ENST00000234668 REP15Q6BDI9 236 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 TIGD7Q6NT04 549 aaPredicted RBP9.17□□□□□ -0.94
SYDE2-201ENST00000234668 UGT2A3Q6UWM9 527 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 ADGRG6Q86SQ4 1221 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 RASAL3Q86YV0 1011 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 IFNL1Q8IU54 200 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 HOMEZQ8IX15 550 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 ST13P4Q8IZP2 240 aaPredicted RBP9.17□□□□□ -0.94
SYDE2-201ENST00000234668 LZTR1Q8N653 840 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 ARRDC2Q8TBH0 407 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 PPWD1Q96BP3 646 aaKnown RBP9.17□□□□□ -0.94
SYDE2-201ENST00000234668 SERPINB11Q96P15 392 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 GRIP2Q9C0E4 1043 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 GSTO2Q9H4Y5 243 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 MID1IP1Q9NPA3 183 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 SEMA4BQ9NPR2 832 aaPredicted RBP9.17□□□□□ -0.94
SYDE2-201ENST00000234668 TBC1D13Q9NVG8 400 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 UTP6Q9NYH9 597 aaKnown RBP9.17□□□□□ -0.94
SYDE2-201ENST00000234668 MARCH2Q9P0N8 246 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 IKZF3Q9UKT9 509 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 V9GYQ6 96 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 C5orf42Q9H799 3197 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 ZNF839A8K0R7 811 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 NR5A2O00482 541 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 ACOT8O14734 319 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 LDB2O43679 373 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 RAMP2O60895 175 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 ZNF623O75123 536 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 TIPRLO75663 272 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 ALDOCP09972 364 aaKnown RBP9.16□□□□□ -0.94
SYDE2-201ENST00000234668 FAM163BP0C2L3 166 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 COL6A2P12110 1019 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 RPL17P18621 184 aaKnown RBP9.16□□□□□ -0.94
SYDE2-201ENST00000234668 PRDX3P30048 256 aaKnown RBP9.16□□□□□ -0.94
SYDE2-201ENST00000234668 RGRP47804 291 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 SCNN1BP51168 640 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 SLC7A2P52569 658 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 CHN2P52757 468 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 PFKPQ01813 784 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 DSC3Q14574 896 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 UNC50Q53HI1 259 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 MTX3Q5HYI7 312 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 KLC3Q6P597 504 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 GLB1LQ6UWU2 654 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 MON1AQ86VX9 555 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 MYO1HQ8N1T3 1032 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 CPSF7Q8N684 471 aaKnown RBP9.16□□□□□ -0.94
SYDE2-201ENST00000234668 EME1Q96AY2 570 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 SLC29A1Q99808 456 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 CIB1Q99828 191 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 ZBED2Q9BTP6 218 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 NOL11Q9H8H0 719 aaKnown RBP9.16□□□□□ -0.94
SYDE2-201ENST00000234668 COQ10BQ9H8M1 238 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 AKTIPQ9H8T0 292 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 SARS2Q9NP81 518 aaKnown RBP9.16□□□□□ -0.94
SYDE2-201ENST00000234668 CACNA2D2Q9NY47 1150 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.16□□□□□ -0.947e-7■■■□□ 17.9
SYDE2-201ENST00000234668 RIMS3Q9UJD0 308 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 A0A087X1B8 175 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 MT-ND1P03886 318 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 FESP07332 822 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 CYBAP13498 195 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 GFAPP14136 432 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 ARL1P40616 181 aaPredicted RBP9.16□□□□□ -0.94
SYDE2-201ENST00000234668 LEPRP48357 1165 aaKnown RBP9.16□□□□□ -0.94
SYDE2-201ENST00000234668 AGTR2P50052 363 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 RPS24P62847 133 aaKnown RBP9.16□□□□□ -0.94
SYDE2-201ENST00000234668 ADGRE1Q14246 886 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 MBTPS1Q14703 1052 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 RETREG3Q86VR2 466 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 FUNDC1Q8IVP5 155 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 RMDN1Q96DB5 314 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 SPATA16Q9BXB7 569 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 PRPF19Q9UMS4 504 aaKnown RBP9.16□□□□□ -0.94
SYDE2-201ENST00000234668 LZTS1Q9Y250 596 aa9.16□□□□□ -0.94
SYDE2-201ENST00000234668 NYNRINQ9P2P1 1898 aaKnown RBP9.16□□□□□ -0.94
SYDE2-201ENST00000234668 C7orf72A4D263 438 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 TRPC5OSA6NMA1 111 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 IQCF5A8MTL0 148 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 MRASO14807 208 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 CD3EAPO15446 510 aaKnown RBP9.15□□□□□ -0.94
SYDE2-201ENST00000234668 NPHS1O60500 1241 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 ATXN1LP0C7T5 689 aaKnown RBP9.15□□□□□ -0.94
SYDE2-201ENST00000234668 SLC2A3P11169 496 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms