RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 AGR3Q8TD06 166 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 SP7Q8TDD2 431 aaPredicted RBP25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 MRGPRX2Q96LB1 330 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 SIK2Q9H0K1 926 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 TRPC7Q9HCX4 862 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 ATP13A1Q9HD20 1204 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 KCNU1A8MYU2 1149 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 SDHDO14521 159 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 HLA-DQB2P05538 268 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 SLC2A3P11169 496 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 AVPR1AP37288 418 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 MAGEA11P43364 429 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 THOP1P52888 689 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 FOLH1Q04609 750 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 TNK2Q07912 1038 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 SMARCB1Q12824 385 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 CNGA3Q16281 694 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 GRAMD1BQ3KR37 738 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 SLC8B1Q6J4K2 584 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 ARHGAP36Q6ZRI8 547 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 MFSD6LQ8IWD5 586 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 FBXO22Q8NEZ5 403 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 FCRL2Q96LA5 508 aaPredicted RBP25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 MRPL1Q9BYD6 325 aaKnown RBP25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 PLK2Q9NYY3 685 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 IPO11Q9UI26 975 aaKnown RBP25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 COPG1Q9Y678 874 aaKnown RBP25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 MTMR11A4FU01 709 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 H0YJX3 145 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 TRIM38O00635 465 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 HOXB8P17481 243 aaPredicted RBP25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 RENBPP51606 427 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 NDST2P52849 883 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 DLG1Q12959 904 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 SQLEQ14534 574 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 TECRLQ5HYJ1 363 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 ARTNQ5T4W7 220 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 RASIP1Q5U651 963 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 ZNF470Q6ECI4 717 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 CCNYL1Q8N7R7 359 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 HIPK4Q8NE63 616 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 RIN3Q8TB24 985 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 HEXDCQ8WVB3 486 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 CLP1Q92989 425 aaKnown RBP25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 CATSPER2Q96P56 530 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 SPATA16Q9BXB7 569 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 MEAF6Q9HAF1 191 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 IGSF5Q9NSI5 407 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 EPS15L1Q9UBC2 864 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 SARDHQ9UL12 918 aa25.01■■□□□ 1.59
RUNDC3A-201ENST00000225441 TCAF2A6NFQ2 919 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 CCDC85CA6NKD9 419 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 TLL1O43897 1013 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 LTA4HP09960 611 aaKnown RBP25■■□□□ 1.59
RUNDC3A-201ENST00000225441 INHBCP55103 352 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 DYNC1I2Q13409 638 aaKnown RBP25■■□□□ 1.59
RUNDC3A-201ENST00000225441 ACAP2Q15057 778 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 KDELC1Q6UW63 502 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 UGT2A3Q6UWM9 527 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 RNF19BQ6ZMZ0 732 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 TICAM1Q8IUC6 712 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 SCN4BQ8IWT1 228 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 TXNDC5Q8NBS9 432 aaKnown RBP25■■□□□ 1.59
RUNDC3A-201ENST00000225441 ATAD1Q8NBU5 361 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 SPPL2BQ8TCT7 592 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 SERPINB11Q96P15 392 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 TRIM4Q9C037 500 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 POMKQ9H5K3 350 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 ADAM12O43184 909 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 F7P08709 466 aaPredicted RBP25■■□□□ 1.59
RUNDC3A-201ENST00000225441 ATP4BP51164 291 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 LAMB3Q13751 1172 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 PPM1LQ5SGD2 360 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 UMODL1-AS1Q8N2C9 162 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 C2orf15Q8WU43 125 aaKnown RBP25■■□□□ 1.59
RUNDC3A-201ENST00000225441 DCUN1D1Q96GG9 259 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 C8orf48Q96LL4 319 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 OMDQ99983 421 aa25■■□□□ 1.59
RUNDC3A-201ENST00000225441 DDX50Q9BQ39 737 aaKnown RBP25■■□□□ 1.59
RUNDC3A-201ENST00000225441 SUCOQ9UBS9 1254 aaKnown RBP25■■□□□ 1.59
RUNDC3A-201ENST00000225441 PRSS51A0A1B0GVH4 220 aa24.99■■□□□ 1.59
RUNDC3A-201ENST00000225441 SLC7A4O43246 635 aa24.99■■□□□ 1.59
RUNDC3A-201ENST00000225441 MAP3K13O43283 966 aa24.99■■□□□ 1.59
RUNDC3A-201ENST00000225441 IPO13O94829 963 aaKnown RBP24.99■■□□□ 1.59
RUNDC3A-201ENST00000225441 RPL17P18621 184 aaKnown RBP24.99■■□□□ 1.59
RUNDC3A-201ENST00000225441 MLLT6P55198 1093 aaPredicted RBP24.99■■□□□ 1.59
RUNDC3A-201ENST00000225441 WNT3AP56704 352 aa24.99■■□□□ 1.59
RUNDC3A-201ENST00000225441 TRAP1Q12931 704 aaKnown RBP24.99■■□□□ 1.59
RUNDC3A-201ENST00000225441 CEACAM7Q14002 265 aa24.99■■□□□ 1.59
RUNDC3A-201ENST00000225441 LRRC36Q1X8D7 754 aa24.99■■□□□ 1.59
RUNDC3A-201ENST00000225441 ACBD5Q5T8D3 534 aaPredicted RBP24.99■■□□□ 1.59
RUNDC3A-201ENST00000225441 THEMIS2Q5TEJ8 643 aa24.99■■□□□ 1.59
RUNDC3A-201ENST00000225441 IRAK1BP1Q5VVH5 260 aa24.99■■□□□ 1.59
RUNDC3A-201ENST00000225441 IMP4Q96G21 291 aaKnown RBP24.99■■□□□ 1.59
RUNDC3A-201ENST00000225441 VCX3AQ9NNX9 186 aa24.99■■□□□ 1.59
RUNDC3A-201ENST00000225441 RIMS3Q9UJD0 308 aa24.99■■□□□ 1.59
RUNDC3A-201ENST00000225441 COMMD3-BMI1R4GMX3 469 aa24.99■■□□□ 1.59
RUNDC3A-201ENST00000225441 E9PAM4 449 aa24.98■■□□□ 1.59
RUNDC3A-201ENST00000225441 TNFRSF10BO14763 440 aa24.98■■□□□ 1.59
RUNDC3A-201ENST00000225441 PMPCBO75439 489 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms