RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 LPCAT2Q7L5N7 544 aa13.16□□□□□ -0.3
PLOD3-201ENST00000223127 CFAP52Q8N1V2 620 aa13.16□□□□□ -0.3
PLOD3-201ENST00000223127 PLD6Q8N2A8 252 aaKnown RBP13.16□□□□□ -0.3
PLOD3-201ENST00000223127 ATP6V0D2Q8N8Y2 350 aa13.16□□□□□ -0.3
PLOD3-201ENST00000223127 TDRD5Q8NAT2 981 aaKnown RBP13.16□□□□□ -0.3
PLOD3-201ENST00000223127 TSPAN14Q8NG11 270 aa13.16□□□□□ -0.3
PLOD3-201ENST00000223127 DLG3Q92796 817 aa13.16□□□□□ -0.3
PLOD3-201ENST00000223127 TOP1MTQ969P6 601 aa13.16□□□□□ -0.3
PLOD3-201ENST00000223127 MYEOVQ96EZ4 313 aa13.16□□□□□ -0.3
PLOD3-201ENST00000223127 CNDP1Q96KN2 507 aa13.16□□□□□ -0.3
PLOD3-201ENST00000223127 VAT1Q99536 393 aa13.16□□□□□ -0.3
PLOD3-201ENST00000223127 ATXN3LQ9H3M9 355 aa13.16□□□□□ -0.3
PLOD3-201ENST00000223127 WDR55Q9H6Y2 383 aaPredicted RBP13.16□□□□□ -0.3
PLOD3-201ENST00000223127 FAIMQ9NVQ4 179 aa13.16□□□□□ -0.3
PLOD3-201ENST00000223127 RBM22Q9NW64 420 aaKnown RBP eCLIP13.16□□□□□ -0.3
PLOD3-201ENST00000223127 IPO11Q9UI26 975 aaKnown RBP13.16□□□□□ -0.3
PLOD3-201ENST00000223127 COL4A4P53420 1690 aaPredicted RBP13.15□□□□□ -0.3
PLOD3-201ENST00000223127 C7orf72A4D263 438 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 STX16-NPEPL1H3BU86 382 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 ENO3P13929 434 aaPredicted RBP13.15□□□□□ -0.3
PLOD3-201ENST00000223127 NELFEP18615 380 aaKnown RBP13.15□□□□□ -0.3
PLOD3-201ENST00000223127 METTL21CQ5VZV1 264 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 DHRS4L2Q6PKH6 230 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 PGAM4Q8N0Y7 254 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 BBS5Q8N3I7 341 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 LZTR1Q8N653 840 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 SMYD1Q8NB12 490 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 CDKL2Q92772 493 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 DPF3Q92784 378 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 GFM2Q969S9 779 aaKnown RBP13.15□□□□□ -0.3
PLOD3-201ENST00000223127 ZNF669Q96BR6 464 aaPredicted RBP13.15□□□□□ -0.3
PLOD3-201ENST00000223127 PABPC5Q96DU9 382 aaKnown RBP13.15□□□□□ -0.3
PLOD3-201ENST00000223127 HMCESQ96FZ2 354 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 BTN2A3PQ96KV6 586 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 PPP1R36Q96LQ0 422 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 FCRL3Q96P31 734 aaPredicted RBP13.15□□□□□ -0.3
PLOD3-201ENST00000223127 KLHL5Q96PQ7 755 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 ZYG11BQ9C0D3 744 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 NOL6Q9H6R4 1146 aaKnown RBP13.15□□□□□ -0.3
PLOD3-201ENST00000223127 SNX15Q9NRS6 342 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 BFARQ9NZS9 450 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 J3KR12 359 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 SCAMP3O14828 347 aaKnown RBP13.15□□□□□ -0.3
PLOD3-201ENST00000223127 PMPCBO75439 489 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 GJB5O95377 273 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 ZNF26P17031 533 aaPredicted RBP13.15□□□□□ -0.3
PLOD3-201ENST00000223127 MPSTP25325 297 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 SMARCB1Q12824 385 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 PRPSAP1Q14558 356 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 TAF12Q16514 161 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 KCTD11Q693B1 232 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 OTOP2Q7RTS6 562 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 PDCD6IPQ8WUM4 868 aaKnown RBP13.15□□□□□ -0.3
PLOD3-201ENST00000223127 MFSD3Q96ES6 412 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 ATXN7L3BQ96GX2 97 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 C1orf74Q96LT6 269 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 HAUS8Q9BT25 410 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 ZNF385DQ9H6B1 395 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 CHRAC1Q9NRG0 131 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 OLA1Q9NTK5 396 aaKnown RBP13.15□□□□□ -0.3
PLOD3-201ENST00000223127 TBCCD1Q9NVR7 557 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 WBP1LQ9NX94 342 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 SH3GLB1Q9Y371 365 aa13.15□□□□□ -0.3
PLOD3-201ENST00000223127 RGSL1A5PLK6 1076 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 GOLGA8TH3BQL2 631 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 MATN3O15232 486 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 CFLARO15519 480 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 BCAS2O75934 225 aaPredicted RBP13.14□□□□□ -0.31
PLOD3-201ENST00000223127 HLA-DQB2P05538 268 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 POLBP06746 335 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 TYK2P29597 1187 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 STT3AP46977 705 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 MAXP61244 160 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 TXNL4AP83876 142 aaKnown RBP13.14□□□□□ -0.31
PLOD3-201ENST00000223127 ITKQ08881 620 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 NRF1Q16656 503 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 ZBTB8BQ8NAP8 495 aaPredicted RBP13.14□□□□□ -0.31
PLOD3-201ENST00000223127 GRIN3AQ8TCU5 1115 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 BIRC8Q96P09 236 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 WDR41Q9HAD4 459 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 MICAL3Q7RTP6 2002 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 TTC24A2A3L6 582 aaPredicted RBP13.14□□□□□ -0.31
PLOD3-201ENST00000223127 TRIM43BA6NCK2 446 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 G3V2L1 256 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 ACOT8O14734 319 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 CHRNGP07510 517 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 MAGEA12P43365 314 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 CD97P48960 835 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 TUFMP49411 452 aaKnown RBP13.14□□□□□ -0.31
PLOD3-201ENST00000223127 NAB1Q13506 487 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 PCSK7Q16549 785 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 CCDC153Q494R4 210 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 CARM1Q86X55 608 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 C2orf15Q8WU43 125 aaKnown RBP13.14□□□□□ -0.31
PLOD3-201ENST00000223127 TRIM43Q96BQ3 446 aaPredicted RBP13.14□□□□□ -0.31
PLOD3-201ENST00000223127 ZNF558Q96NG5 402 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 TSGA13Q96PP4 275 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 EPS15L1Q9UBC2 864 aa13.14□□□□□ -0.31
PLOD3-201ENST00000223127 FAF1Q9UNN5 650 aaPredicted RBP13.14□□□□□ -0.31
PLOD3-201ENST00000223127 TMEM114B3SHH9 223 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms