RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 DDIASQ8IXT1 998 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 KLHDC8BQ8IXV7 354 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 CALML6Q8TD86 181 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 LPGAT1Q92604 370 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 GSTO2Q9H4Y5 243 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 CCSER2Q9H7U1 834 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 EML4Q9HC35 981 aaKnown RBP14.66□□□□□ -0.06
CNOT3-201ENST00000221232 MARCH2Q9P0N8 246 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 A0A1B0GTW7 788 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 CCDC162PA2VCL2 907 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 ACOT8O14734 319 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 CASQ2O14958 399 aaPredicted RBP14.66□□□□□ -0.06
CNOT3-201ENST00000221232 CAPN15O75808 1086 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 CYBAP13498 195 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 GATMP50440 423 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 CLCN5P51795 746 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 KPNA2P52292 529 aaKnown RBP14.66□□□□□ -0.06
CNOT3-201ENST00000221232 SH3BP2P78314 561 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 CLLU1OSQ5K130 101 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 MFSD14CQ5VZR4 134 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 ZNF549Q6P9A3 640 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 PTGR2Q8N8N7 351 aaPredicted RBP14.66□□□□□ -0.06
CNOT3-201ENST00000221232 ARRDC2Q8TBH0 407 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 PTCD2Q8WV60 388 aaKnown RBP14.66□□□□□ -0.06
CNOT3-201ENST00000221232 SOCS4Q8WXH5 440 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 EME1Q96AY2 570 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 FAM193BQ96PV7 902 aaPredicted RBP14.66□□□□□ -0.06
CNOT3-201ENST00000221232 CENPKQ9BS16 269 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 CACNA2D2Q9NY47 1150 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.66□□□□□ -0.06
CNOT3-201ENST00000221232 RIMS3Q9UJD0 308 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 SNX13Q9Y5W8 968 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 A0A1B0GTL3 188 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 LDB2O43679 373 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 BCAS2O75934 225 aaPredicted RBP14.65□□□□□ -0.06
CNOT3-201ENST00000221232 RBP1P09455 135 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 SLC2A3P11169 496 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 RHOQP17081 205 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 RAB27AP51159 221 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 YBX1P67809 324 aaKnown RBP14.65□□□□□ -0.06
CNOT3-201ENST00000221232 ACAP2Q15057 778 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 UNC50Q53HI1 259 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 VARS2Q5ST30 1063 aaKnown RBP14.65□□□□□ -0.06
CNOT3-201ENST00000221232 UMODL1-AS1Q8N2C9 162 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 PELI3Q8N2H9 469 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 DCBLD1Q8N8Z6 715 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 TRPC4APQ8TEL6 797 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 PPWD1Q96BP3 646 aaKnown RBP14.65□□□□□ -0.06
CNOT3-201ENST00000221232 SLC39A13Q96H72 371 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 MAELQ96JY0 434 aaKnown RBP14.65□□□□□ -0.06
CNOT3-201ENST00000221232 UBXN10Q96LJ8 280 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 TRAPPC9Q96Q05 1148 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 SPATA16Q9BXB7 569 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 CRISPLD1Q9H336 500 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 ZFYVE28Q9HCC9 887 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 MID1IP1Q9NPA3 183 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 PCDHB8Q9UN66 801 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 MRASO14807 208 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 LINC00032P0C843 101 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 FMO4P31512 558 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 DNAJB13P59910 316 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 CYTH1Q15438 398 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 OR7D4Q8NG98 312 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 RPL10LQ96L21 214 aaKnown RBP14.65□□□□□ -0.06
CNOT3-201ENST00000221232 PRPF18Q99633 342 aaKnown RBP14.65□□□□□ -0.06
CNOT3-201ENST00000221232 MRM3Q9HC36 420 aaKnown RBP14.65□□□□□ -0.06
CNOT3-201ENST00000221232 SCML2Q9UQR0 700 aa14.65□□□□□ -0.06
CNOT3-201ENST00000221232 H3BMM5 538 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 NR5A2O00482 541 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 TRIM38O00635 465 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 CD3EAPO15446 510 aaKnown RBP14.64□□□□□ -0.07
CNOT3-201ENST00000221232 KPNA6O60684 536 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 GLP2RO95838 553 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 SNRPB2P08579 225 aaKnown RBP14.64□□□□□ -0.07
CNOT3-201ENST00000221232 GFAPP14136 432 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 CDKN1CP49918 316 aaPredicted RBP14.64□□□□□ -0.07
CNOT3-201ENST00000221232 PRKCZQ05513 592 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 GRB7Q14451 532 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 ZNF235Q14590 738 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 OR4D1Q15615 310 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 VPS26BQ4G0F5 336 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 ZNF678Q5SXM1 525 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 CYHR1Q6ZMK1 362 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 GALNT15Q8N3T1 639 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 TSPAN17Q96FV3 270 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 AKTIPQ9H8T0 292 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 PRDM5Q9NQX1 630 aaPredicted RBP14.64□□□□□ -0.07
CNOT3-201ENST00000221232 LZTS1Q9Y250 596 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 TIMM22Q9Y584 194 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 A0A1B0GVG6 124 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 TPST1O60507 370 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 TSPAN3O60637 253 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 ATXN1LP0C7T5 689 aaKnown RBP14.64□□□□□ -0.07
CNOT3-201ENST00000221232 CHRM3P20309 590 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 IMPDH1P20839 514 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 POLD2P49005 469 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 SLC7A2P52569 658 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 STX5Q13190 355 aa14.64□□□□□ -0.07
CNOT3-201ENST00000221232 CAPRIN1Q14444 709 aaKnown RBP14.64□□□□□ -0.07
CNOT3-201ENST00000221232 KIAA0408Q6ZU52 694 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms