RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 HLTFQ14527 1009 aaKnown RBP eCLIP19.75■□□□□ 0.75
SYNGR1-201ENST00000216155 TGIF1Q15583 401 aa19.75■□□□□ 0.75
SYNGR1-201ENST00000216155 C14orf28Q4W4Y0 310 aa19.75■□□□□ 0.75
SYNGR1-201ENST00000216155 CYP4V2Q6ZWL3 525 aaPredicted RBP19.75■□□□□ 0.75
SYNGR1-201ENST00000216155 FAM46DQ8NEK8 389 aa19.75■□□□□ 0.75
SYNGR1-201ENST00000216155 CCL4L1Q8NHW4 92 aa19.75■□□□□ 0.75
SYNGR1-201ENST00000216155 EIF3CQ99613 913 aaKnown RBP19.75■□□□□ 0.75
SYNGR1-201ENST00000216155 LGR4Q9BXB1 951 aa19.75■□□□□ 0.75
SYNGR1-201ENST00000216155 HSD3B7Q9H2F3 369 aa19.75■□□□□ 0.75
SYNGR1-201ENST00000216155 WDR26Q9H7D7 661 aa19.75■□□□□ 0.75
SYNGR1-201ENST00000216155 PCSK1NQ9UHG2 260 aa19.75■□□□□ 0.75
SYNGR1-201ENST00000216155 RNF215Q9Y6U7 377 aa19.75■□□□□ 0.75
SYNGR1-201ENST00000216155 BOD1L1Q8NFC6 3051 aa19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 LRRC10BA6NIK2 292 aa19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 TMCO5BA8MYB1 307 aa19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 DFFAO00273 331 aa19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 TNFRSF10CO14798 259 aa19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 HOXC4P09017 264 aaPredicted RBP19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 PNLIPP16233 465 aa19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 KELP23276 732 aa19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 TRIM23P36406 574 aa19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 NSUN2Q08J23 767 aaKnown RBP eCLIP19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 RFTN1Q14699 578 aaPredicted RBP19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 ERMARDQ5T6L9 678 aa19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 SPECC1LQ69YQ0 1117 aa19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 PLEKHA7Q6IQ23 1121 aa19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 CLEC17AQ6ZS10 378 aa19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 TMPRSS9Q7Z410 1059 aa19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 IRF2BP2Q7Z5L9 587 aa19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 TRIM7Q9C029 511 aa19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 CYP4F12Q9HCS2 524 aa19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 PARVAQ9NVD7 372 aa19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 ARHGEF17Q96PE2 2063 aaPredicted RBP19.74■□□□□ 0.75
SYNGR1-201ENST00000216155 PRSS38A1L453 326 aa19.73■□□□□ 0.75
SYNGR1-201ENST00000216155 A8MX80 341 aa19.73■□□□□ 0.75
SYNGR1-201ENST00000216155 PYCARD-AS1I3L0S3 204 aa19.73■□□□□ 0.75
SYNGR1-201ENST00000216155 AGRPO00253 132 aa19.73■□□□□ 0.75
SYNGR1-201ENST00000216155 NVLO15381 856 aaKnown RBP19.73■□□□□ 0.75
SYNGR1-201ENST00000216155 CCDC172P0C7W6 258 aa19.73■□□□□ 0.75
SYNGR1-201ENST00000216155 LIPCP11150 499 aa19.73■□□□□ 0.75
SYNGR1-201ENST00000216155 SCNN1BP51168 640 aa19.73■□□□□ 0.75
SYNGR1-201ENST00000216155 IL10RBQ08334 325 aa19.73■□□□□ 0.75
SYNGR1-201ENST00000216155 NCAPHQ15003 741 aa19.73■□□□□ 0.75
SYNGR1-201ENST00000216155 PPP6R3Q5H9R7 873 aaPredicted RBP19.73■□□□□ 0.75
SYNGR1-201ENST00000216155 SLITRK4Q8IW52 837 aa19.73■□□□□ 0.75
SYNGR1-201ENST00000216155 TP53INP2Q8IXH6 220 aa19.73■□□□□ 0.75
SYNGR1-201ENST00000216155 PAF1Q8N7H5 531 aa19.73■□□□□ 0.75
SYNGR1-201ENST00000216155 DPEP2Q9H4A9 486 aa19.73■□□□□ 0.75
SYNGR1-201ENST00000216155 ANO10Q9NW15 660 aa19.73■□□□□ 0.75
SYNGR1-201ENST00000216155 LRIT1Q9P2V4 623 aa19.73■□□□□ 0.75
SYNGR1-201ENST00000216155 B4GALT6Q9UBX8 382 aa19.73■□□□□ 0.75
SYNGR1-201ENST00000216155 DAPK3O43293 454 aa19.72■□□□□ 0.75
SYNGR1-201ENST00000216155 NUDT21O43809 227 aaKnown RBP19.72■□□□□ 0.75
SYNGR1-201ENST00000216155 MIPP30301 263 aa19.72■□□□□ 0.75
SYNGR1-201ENST00000216155 ETV5P41161 510 aa19.72■□□□□ 0.75
SYNGR1-201ENST00000216155 AP1S1P61966 158 aa19.72■□□□□ 0.75
SYNGR1-201ENST00000216155 POLR2LP62875 67 aaKnown RBP19.72■□□□□ 0.75
SYNGR1-201ENST00000216155 DPYSQ14117 519 aa19.72■□□□□ 0.75
SYNGR1-201ENST00000216155 ACOX1Q15067 660 aa19.72■□□□□ 0.75
SYNGR1-201ENST00000216155 PNCKQ6P2M8 343 aa19.72■□□□□ 0.75
SYNGR1-201ENST00000216155 TMEM159Q96B96 161 aa19.72■□□□□ 0.75
SYNGR1-201ENST00000216155 COQ10AQ96MF6 247 aa19.72■□□□□ 0.75
SYNGR1-201ENST00000216155 PSKH2Q96QS6 385 aa19.72■□□□□ 0.75
SYNGR1-201ENST00000216155 FOXJ2Q9P0K8 574 aa19.72■□□□□ 0.75
SYNGR1-201ENST00000216155 SEPT3Q9UH03 358 aa19.72■□□□□ 0.75
SYNGR1-201ENST00000216155 MYO18BQ8IUG5 2567 aa19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 PRAMEF33A0A0G2JMD5 474 aa19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 TTC24A2A3L6 582 aaPredicted RBP19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 TMEM191CA6NGB0 347 aa19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 PRAMEF10O60809 474 aa19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 MYCLP1P12525 358 aaPredicted RBP19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 ATP1A3P13637 1013 aa19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 CDK11BP21127 795 aaKnown RBP19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 TNFAIP3P21580 790 aa19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 MAZP56270 477 aaKnown RBP19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 SLC10A7Q0GE19 358 aa19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 LBRQ14739 615 aaKnown RBP19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 CNGA3Q16281 694 aa19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 STX1AQ16623 288 aa19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 LINC00303Q3SY05 128 aa19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 MAP9Q49MG5 647 aa19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 TMCO4Q5TGY1 634 aa19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 PPP1R2P3Q6NXS1 205 aa19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 SASS6Q6UVJ0 657 aa19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 EXD3Q8N9H8 876 aa19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 FNIP1Q8TF40 1166 aa19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 SPOCK2Q92563 424 aa19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 NUS1Q96E22 293 aa19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 SGF29Q96ES7 293 aa19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 CWC15Q9P013 229 aaKnown RBP19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 MOSPD1Q9UJG1 213 aa19.71■□□□□ 0.75
SYNGR1-201ENST00000216155 TEX33O43247 280 aa19.7■□□□□ 0.74
SYNGR1-201ENST00000216155 HTRA2O43464 458 aaPredicted RBP19.7■□□□□ 0.74
SYNGR1-201ENST00000216155 SLC28A2O43868 658 aa19.7■□□□□ 0.74
SYNGR1-201ENST00000216155 PRPSAP2O60256 369 aa19.7■□□□□ 0.74
SYNGR1-201ENST00000216155 LRCH4O75427 683 aa19.7■□□□□ 0.74
SYNGR1-201ENST00000216155 B4GALNT1Q00973 533 aa19.7■□□□□ 0.74
SYNGR1-201ENST00000216155 ARHGEF7Q14155 803 aa19.7■□□□□ 0.74
SYNGR1-201ENST00000216155 TSR1Q2NL82 804 aaKnown RBP19.7■□□□□ 0.74
SYNGR1-201ENST00000216155 PHF19Q5T6S3 580 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms