RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 GAL3ST1Q99999 423 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 ZMYND8Q9ULU4 1186 aaPredicted RBP13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 TRIM38O00635 465 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 NOS1APO75052 506 aaPredicted RBP13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 ULK1O75385 1050 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 RECQL5O94762 991 aaPredicted RBP13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 ATP5F1P24539 256 aaPredicted RBP13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 MTHFRP42898 656 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 FCRL2Q96LA5 508 aaPredicted RBP13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 SLC35C2Q9NQQ7 365 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 SPATA31A6Q5VVP1 1343 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 RIC1Q4ADV7 1423 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 SIM2Q14190 667 aaPredicted RBP13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 NDUFAF6Q330K2 333 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 RALGPS1Q5JS13 557 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 FAM47BQ8NA70 645 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 SMYD1Q8NB12 490 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 SLC9A7Q96T83 725 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 PTPN18Q99952 460 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 TINF2Q9BSI4 451 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 LRRC19Q9H756 370 aa13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 THG1LQ9NWX6 298 aaKnown RBP13.64□□□□□ -0.23
TGFBR3-201ENST00000212355 DHRS12A0PJE2 317 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 PSMD9O00233 223 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 RFXANKO14593 260 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 OR5F1O95221 314 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 AMHP03971 560 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 PREPLQ4J6C6 727 aaPredicted RBP13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 HECTD3Q5T447 861 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 PLPP4Q5VZY2 271 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 CAMK1DQ8IU85 385 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 CDK5RAP1Q96SZ6 601 aaKnown RBP13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 MAP4K5Q9Y4K4 846 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 CNTNAP1P78357 1384 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 VPS4BO75351 444 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 GBE1Q04446 702 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 MSLNQ13421 630 aaPredicted RBP13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 ARMC3Q5W041 872 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 REPS1Q96D71 796 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 ZNF490Q9ULM2 529 aaPredicted RBP13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 C9P02748 559 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 TNK2Q07912 1038 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 RGS21Q2M5E4 152 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 BROXQ5VW32 411 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 PTCHD4Q6ZW05 846 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 CUZD1Q86UP6 607 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 AHI1Q8N157 1196 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 PCDH18Q9HCL0 1135 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 CMTM6Q9NX76 183 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 VAV3Q9UKW4 847 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 BTBD3Q9Y2F9 522 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 OR10H1Q9Y4A9 318 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 TMCC2O75069 709 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 SERPINA6P08185 405 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 AFTPHQ6ULP2 937 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 SLC51AQ86UW1 340 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 FAM83AQ86UY5 434 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 FAM9CQ8IZT9 166 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 CLEC4CQ8WTT0 213 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 WDR60Q8WVS4 1066 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 WRAP53Q9BUR4 548 aaKnown RBP13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 CCDC182A6NF36 153 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 ELNP15502 786 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 SERPINA13PQ6UXR4 307 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 CEP295NLQ96MC4 621 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 SLITRK2Q9H156 845 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 IMP3Q9NV31 184 aaKnown RBP13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 NKIRAS2Q9NYR9 191 aa13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 AGO1Q9UL18 857 aaKnown RBP13.63□□□□□ -0.23
TGFBR3-201ENST00000212355 MAFO75444 373 aaPredicted RBP13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 MRPS5P82675 430 aaKnown RBP13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 MXD1Q05195 221 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 TTC27Q6P3X3 843 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 FNIP1Q8TF40 1166 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 ZHX1-C8orf76Q96EF9 292 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 AGAP2Q99490 1192 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 GMIPQ9P107 970 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 DIP2CQ9Y2E4 1556 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 NKRFO15226 690 aaKnown RBP eCLIP13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 SLC25A14O95258 325 aaPredicted RBP13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 PCCBP05166 539 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 THOP1P52888 689 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 CDC42P60953 191 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 PGBD2Q6P3X8 592 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 TMPRSS11BQ86T26 416 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 VSIG10LQ86VR7 867 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 DENND6AQ8IWF6 608 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 RTL3Q8N8U3 475 aaKnown RBP13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 ARMC5Q96C12 935 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 C19orf60Q96EN9 201 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 PSMD13Q9UNM6 376 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 TRAV19A0A0A6YYK7 116 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 CCDC189A1A4V9 331 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 CYP3A4P08684 503 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 CCNYL3P0C7X3 344 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 ARF4P18085 180 aaPredicted RBP13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 RAB27AP51159 221 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms