RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 HEATR9A2RTY3 570 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 ATP6AP2O75787 350 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 RHOQP17081 205 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 GLDCP23378 1020 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 CDKN2DP55273 166 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 PRKAA1Q13131 559 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 KLHDC10Q6PID8 442 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 C16orf89Q6UX73 402 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 CYP2R1Q6VVX0 501 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 CNTN4Q8IWV2 1026 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 UMODL1-AS1Q8N2C9 162 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 OR13C4Q8NGS5 318 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 FAM81AQ8TBF8 368 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 ATP6V1E2Q96A05 226 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 PRDM5Q9NQX1 630 aaPredicted RBP13.18□□□□□ -0.3
CTNS-201ENST00000046640 IGSF5Q9NSI5 407 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 CDYLQ9Y232 598 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 ARHGEF37A1IGU5 675 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 VILLO15195 856 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 ZNF189O75820 626 aaPredicted RBP13.18□□□□□ -0.3
CTNS-201ENST00000046640 APOA4P06727 396 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 HADHAP40939 763 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 TM4SF4P48230 202 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 CSRP3P50461 194 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 MYBPC1Q00872 1141 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 RALGDSQ12967 914 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 MAP7Q14244 749 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 GRM2Q14416 872 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 PPP1R3AQ16821 1122 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 ZNF423Q2M1K9 1284 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 KIAA0930Q6ICG6 404 aaPredicted RBP13.18□□□□□ -0.3
CTNS-201ENST00000046640 ZNF683Q8IZ20 524 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 LGI2Q8N0V4 545 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 ATP6V0D2Q8N8Y2 350 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 GRIN3AQ8TCU5 1115 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 C1orf74Q96LT6 269 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 NACA2Q9H009 215 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 STARD7Q9NQZ5 370 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.18□□□□□ -0.3
CTNS-201ENST00000046640 MYO16Q9Y6X6 1858 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 TLR5O60602 858 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 EOMESO95936 686 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 CDH13P55290 713 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 PTPRRQ15256 657 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 MYLK3Q32MK0 819 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 HECTD2Q5U5R9 776 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 CLEC6AQ6EIG7 209 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 NADSYN1Q6IA69 706 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 TMEM207Q6UWW9 146 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 OR7D4Q8NG98 312 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 ZFP28Q8NHY6 868 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 CD99L2Q8TCZ2 262 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 BTN2A3PQ96KV6 586 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 LIN28AQ9H9Z2 209 aaKnown RBP13.17□□□□□ -0.3
CTNS-201ENST00000046640 MID2Q9UJV3 735 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 CROCCQ5TZA2 2017 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 PTPRDP23468 1912 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 H3BSA7 217 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 ADAM12O43184 909 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 SLC2A3P11169 496 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 RPL10P27635 214 aaKnown RBP13.17□□□□□ -0.3
CTNS-201ENST00000046640 SOX11P35716 441 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 SP3Q02447 781 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 ADGRE1Q14246 886 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 IL23RQ5VWK5 629 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 KDM1BQ8NB78 822 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 CEP70Q8NHQ1 597 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 ARRDC2Q8TBH0 407 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 C8orf48Q96LL4 319 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 MRPL1Q9BYD6 325 aaKnown RBP13.17□□□□□ -0.3
CTNS-201ENST00000046640 TMEM248Q9NWD8 314 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 LMCD1Q9NZU5 365 aa13.17□□□□□ -0.3
CTNS-201ENST00000046640 MTMR11A4FU01 709 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 CASQ2O14958 399 aaPredicted RBP13.16□□□□□ -0.3
CTNS-201ENST00000046640 RNASEH2AO75792 299 aaKnown RBP13.16□□□□□ -0.3
CTNS-201ENST00000046640 ALDH2P05091 517 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 ME2P23368 584 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 DNAJB2P25686 324 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 PPARGP37231 505 aaPredicted RBP13.16□□□□□ -0.3
CTNS-201ENST00000046640 SLC11A1P49279 550 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 RPS24P62847 133 aaKnown RBP13.16□□□□□ -0.3
CTNS-201ENST00000046640 ZNF235Q14590 738 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 FAM83EQ2M2I3 478 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 PITRM1Q5JRX3 1037 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 FAM26DQ5JW98 314 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 CILP2Q8IUL8 1156 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 NCSTNQ92542 709 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 BHMTQ93088 406 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 EME1Q96AY2 570 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 DGCR14Q96DF8 476 aaKnown RBP13.16□□□□□ -0.3
CTNS-201ENST00000046640 PRICKLE1Q96MT3 831 aaPredicted RBP13.16□□□□□ -0.3
CTNS-201ENST00000046640 MRPL57Q9BQC6 102 aaKnown RBP13.16□□□□□ -0.3
CTNS-201ENST00000046640 Q9H521 79 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 PREBQ9HCU5 417 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 TLR8Q9NR97 1041 aaKnown RBP13.16□□□□□ -0.3
CTNS-201ENST00000046640 NCKIPSDQ9NZQ3 722 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 C6orf203Q9P0P8 240 aaPredicted RBP13.16□□□□□ -0.3
CTNS-201ENST00000046640 GMPR2Q9P2T1 348 aaKnown RBP13.16□□□□□ -0.3
CTNS-201ENST00000046640 VWA7Q9Y334 891 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 COPG1Q9Y678 874 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms