RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 SERPINA13PQ6UXR4 307 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 CCDC54Q8NEL0 328 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 FIG4Q92562 907 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 MRI1Q9BV20 369 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 EPB41L4AQ9HCS5 686 aaPredicted RBP6.09□□□□□ -1.43
VPS13D-201ENST00000011700 MID1IP1Q9NPA3 183 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 NAALADL1Q9UQQ1 740 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 TUBGCP6Q96RT7 1819 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 A0A096LPK6 155 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 KLHL33A6NCF5 533 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 PSIP1O75475 530 aaKnown RBP6.09□□□□□ -1.43
VPS13D-201ENST00000011700 PPP3R1P63098 170 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 LPIN1Q14693 890 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 LACTB2Q53H82 288 aaPredicted RBP6.09□□□□□ -1.43
VPS13D-201ENST00000011700 ZBTB10Q96DT7 871 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 MED8Q96G25 268 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 BTF3L4Q96K17 158 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 HGH1Q9BTY7 390 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 NELFAQ9H3P2 528 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 AXIN2Q9Y2T1 843 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 ADAMTS13Q76LX8 1427 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 MCIDASD6RGH6 385 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 E2F3O00716 465 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 KRT36O76013 467 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 TFRCP02786 760 aaKnown RBP6.09□□□□□ -1.43
VPS13D-201ENST00000011700 CYP17A1P05093 508 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 RAG1P15918 1043 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 ADRA1DP25100 572 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 MARSP56192 900 aaKnown RBP6.09□□□□□ -1.43
VPS13D-201ENST00000011700 NRG3P56975 720 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 SLC9A5Q14940 896 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 HERC3Q15034 1050 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 HYIQ5T013 277 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 COLGALT2Q8IYK4 626 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 ZNF540Q8NDQ6 660 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 MLXQ9UH92 298 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 C2CD2Q9Y426 696 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 NDUFB9Q9Y6M9 179 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 CNTNAP5Q8WYK1 1306 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 RGS10O43665 173 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 CDC40O60508 579 aaKnown RBP eCLIP6.09□□□□□ -1.43
VPS13D-201ENST00000011700 NOL4O94818 638 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 KLRC1P26715 233 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 RAB10P61026 200 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 BCL2L1Q07817 233 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 RHEBQ15382 184 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 FAM180AQ6UWF9 173 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 METTL7BQ6UX53 244 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 CHRDL2Q6WN34 429 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 TRMT11Q7Z4G4 463 aaKnown RBP6.09□□□□□ -1.43
VPS13D-201ENST00000011700 ACSS3Q9H6R3 686 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 EIF2B3Q9NR50 452 aaKnown RBP6.09□□□□□ -1.43
VPS13D-201ENST00000011700 ARL8BQ9NVJ2 186 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 TMED5Q9Y3A6 229 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 FAM240BA0A1B0GVZ2 78 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 SH3D21A4FU49 640 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 CLDN25C9JDP6 229 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 PLIN3O60664 434 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 MAP3K6O95382 1288 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 ATP4AP20648 1035 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 POU1F1P28069 291 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 EIF2S3P41091 472 aaKnown RBP6.09□□□□□ -1.43
VPS13D-201ENST00000011700 PTDSS1P48651 473 aaKnown RBP6.09□□□□□ -1.43
VPS13D-201ENST00000011700 GIT2Q14161 759 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 FGD3Q5JSP0 725 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 OLFML2AQ68BL7 652 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 RIPOR1Q6ZS17 1223 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 ARMC8Q8IUR7 673 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 TBC1D10CQ8IV04 446 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 SLC44A3Q8N4M1 653 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 CHP1Q99653 195 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 EXO5Q9H790 373 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 SP140LQ9H930 580 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 PLEKHA1Q9HB21 404 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 MYNNQ9NPC7 610 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 CISHQ9NSE2 258 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 FAM205AQ6ZU69 1335 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 MPDZO75970 2070 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 LRRC10BA6NIK2 292 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 M0R129 80 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 CCNB2O95067 398 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 MMP10P09238 476 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 GJA8P48165 433 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 TAS2R43P59537 309 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 MTMR2Q13614 643 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 USP43Q70EL4 1123 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 DAW1Q8N136 415 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 PLD6Q8N2A8 252 aaKnown RBP6.09□□□□□ -1.43
VPS13D-201ENST00000011700 ZNF527Q8NB42 609 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 TRPM4Q8TD43 1214 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 MRIQ9BWK5 157 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 IL1RL2Q9HB29 575 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 ARHGEF4Q9NR80 690 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 TBC1D14Q9P2M4 693 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 TMPRSS11EQ9UL52 423 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 GRIP1Q9Y3R0 1128 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 TJP1Q07157 1748 aa6.09□□□□□ -1.43
VPS13D-201ENST00000011700 MYPNQ86TC9 1320 aa6.09□□□□□ -1.44
VPS13D-201ENST00000011700 FAM234BA2RU67 622 aa6.09□□□□□ -1.44
VPS13D-201ENST00000011700 GSTT2P0CG29 244 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms