RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Pbx2O35984 430 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Cyp2j6O54750 501 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Igf2bp1O88477 577 aaKnown RBP15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 P01740 135 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Rab10P61027 200 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Nxpe4Q52KP5 543 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Serpina3gQ5I2A0 440 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Dclk2Q6PGN3 756 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ints7Q7TQK1 966 aaKnown RBP15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Olfr366Q7TRY4 309 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Bcas1Q80YN3 633 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Agbl3Q8CDP0 1006 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Serpinb9bQ9DAV6 377 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ddx39bQ9Z1N5 428 aaKnown RBP15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Htatip2Q9Z2G9 242 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 1110002E22RikE0CYV9 1786 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 A630010A05RikA9C473 232 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Gm4450E9Q007 373 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Gm20828J3KMI7 228 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 PargO88622 969 aaKnown RBP15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 SagP20443 403 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ampd1Q3V1D3 745 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Spata48Q5NC83 441 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Itih3Q61704 889 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Hsd3b4Q61767 373 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 PdgfrlQ6PE55 375 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Mtmr12Q80TA6 747 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Pcmtd2Q8BHD8 359 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Suds3Q8BR65 328 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ston2Q8BZ60 895 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 NemfQ8CCP0 1064 aaKnown RBP15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Dennd1cQ8CFK6 786 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ier5lQ99J55 406 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Sytl1Q99N80 567 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Gm20721E9Q2U8 318 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Cd4P06332 457 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Hmx2P43687 273 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ccng1P51945 294 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Kir3dl1P83555 432 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ccdc138Q0VF22 680 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Nat9Q3UG98 241 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Glp2rQ5IXF8 512 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Proser3Q7TSA6 634 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Dnajc6Q80TZ3 938 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ppp1r15bQ8BFW3 697 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Epb41l5Q8BGS1 731 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Mfsd10Q9D2V8 456 aaKnown RBP15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Exoc2Q9D4H1 924 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Cldn22Q9D7U6 220 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Slc8a3S4R2P9 928 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 EsrraO08580 422 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Prl3b1P09586 222 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ets2P15037 468 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Il6raP22272 460 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Foxr1Q3UTB7 268 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Stkld1Q80YS9 662 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Olfr697Q8VFM4 317 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Creld1Q91XD7 420 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 4930513O06RikQ9D549 161 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Akr1a1Q9JII6 325 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Cldn3Q9Z0G9 219 aa15.93■□□□□ 0.14
Trim39-203ENSMUST00000113706 Igkv10-94A0A075B5L1 115 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Tada2bD3Z4Z0 420 aaKnown RBP15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Vmn2r10K7N621 847 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Prdx3P20108 257 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Lim2P56563 173 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Insig1Q8BGI3 259 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Tlk1Q8C0V0 766 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Fmo9Q8C116 539 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Tcf25Q8R3L2 676 aaKnown RBP15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Vps39Q8R5L3 886 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Sorcs3Q8VI51 1219 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Cyp2c70Q91W64 489 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Rnf146Q9CZW6 359 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 B9d1Q9R1S0 204 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ruvbl2Q9WTM5 463 aaKnown RBP15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 RecqlQ9Z129 648 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Gm21731A0A286YDE9 180 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Cdh16O88338 830 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Scd1P13516 355 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Mthfd2P18155 350 aaKnown RBP15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Atp6v0d1P51863 351 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Grid2ipQ0QWG9 1203 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 H2-M10.2Q85ZW9 329 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Kansl2Q8BQR4 486 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Sugp1Q8CH02 643 aaKnown RBP15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Sirt3Q8R104 334 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Impg1Q8R1W8 798 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Rbm12Q8R4X3 992 aaKnown RBP15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Olfr371Q8VGB8 312 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Cep83Q9D5R3 692 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Fhl5Q9WTX7 284 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Tcp11x2A2AEI7 503 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Cyp2a22B2RXZ2 492 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Cdr1E9Q0B4 517 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Acvr1P37172 509 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Stat5aP42230 793 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Man1a1P45700 655 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 TshrP47750 764 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ppp3ccP48455 513 aa15.92■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms