RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Znf683I7HJS4 458 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Gm3187M0QWW3 260 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Ift81O35594 676 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Adcy1O88444 1118 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Slc22a8O88909 537 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 PdgfrbP05622 1098 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Myl4P09541 193 aaKnown RBP11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Acvr2bP27040 536 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 TubP50586 505 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Macrod2Q3UYG8 475 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Kpna1Q60960 538 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Ino80dQ66JY2 873 aaKnown RBP11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Olfr1198Q7TR12 308 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Wasf2Q8BH43 497 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Slc17a6Q8BLE7 582 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Tyw3Q8BSA9 257 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Nup54Q8BTS4 510 aaKnown RBP11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Dnajc3Q91YW3 504 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Npffr2Q924H0 417 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Itgb3bpQ9CQ82 176 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Tle6Q9WVB3 581 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Shroom3Q9QXN0 1986 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Zfp985A2A7A5 519 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Lcn6A2AJB9 181 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Spats1A2RRY8 269 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Aldoart1A6ZI46 419 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Dnmt3cP0DOY1 709 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Adcyap1r1P70205 496 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Lypla1P97823 230 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 B020004J07RikQ3UTC0 476 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Afg1lQ3V384 480 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Itm2aQ61500 263 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Grid2Q61625 1007 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 RadilQ69Z89 1099 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Hmgb4Q6P8W9 181 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Mib1Q80SY4 1006 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Ppp6r2Q8R3Q2 923 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 HnrnprQ8VHM5 632 aaKnown RBP11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 S100a14Q9D2Q8 104 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Apbb2Q9DBR4 760 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Rab13Q9DD03 202 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Rp2Q9EPK2 347 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Epm2aQ9WUA5 330 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Nup205A0A0J9YUD5 2061 aaKnown RBP11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Adamts9E9PUN6 1931 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Lama2Q60675 3118 aaKnown RBP11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Trbv4A0A075B5I2 113 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Skint11A7XV14 364 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 SelenovD3YXG1 328 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 P01644 108 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 P01645 108 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 P01646 108 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 P01647 108 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 PrkcdP28867 674 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Gata5P97489 404 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Atf4Q06507 349 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 4933415F23RikQ14BX6 153 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Serac1Q3U213 654 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 KrtdapQ3V2T4 102 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Cldn11Q60771 207 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Cpa1Q7TPZ8 419 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Olfr20Q7TRX9 314 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Sytl5Q80T23 753 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Znf423Q80TS5 1292 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Trnau1apQ80VC6 287 aaKnown RBP11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 PimregQ8BFY7 231 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Clvs2Q8BG92 327 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Nat14Q8BVG8 206 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Tspan33Q8R3S2 283 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Akr1c12Q9JLI0 323 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Trpc4Q9QUQ5 974 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Dpp6Q9Z218 804 aa11.4□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Esp31A8R0W3 114 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 2310061I04RikB8JJ69 315 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Zfp963D3Z2T8 383 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 PiggD3Z3Y1 983 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Fam71e2L7N480 754 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Clk3O35492 638 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Vps4bP46467 444 aaKnown RBP11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Mc1rQ01727 315 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Gramd2aQ3V3G7 320 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Mthfd1lQ3V3R1 977 aaKnown RBP11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Slc22a16Q497L8 649 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Olfr464Q5SW48 313 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 NkaplQ5SZT7 395 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Pabpn1lQ5XFR0 273 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Lag3Q61790 521 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Capn3Q64691 821 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Sort1Q6PHU5 825 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Smg5Q6ZPY2 1017 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Deup1Q7M6Y5 601 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Spata7Q80VP2 582 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Cgrrf1Q8BMJ7 332 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Chst8Q8BQ86 417 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Tmtc3Q8BRH0 920 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 UstQ8BUB6 407 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Abi1Q8CBW3 481 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Ppp1r14cQ8R4S0 164 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Nle1Q8VEJ4 485 aa11.39□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Uqcc2Q9CQY6 136 aa11.39□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 70.5 ms