RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Snapc1Q8K0S9 389 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Abhd11Q8K4F5 307 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ces2aQ8QZR3 558 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Olfr695Q8VFM3 315 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Olfr665Q8VG79 316 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Pcdhga10Q91XY9 930 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ccdc130Q9D516 385 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Fip1l1Q9D824 581 aaKnown RBP12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Rps6ka2Q9WUT3 733 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Adam17Q9Z0F8 827 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Pbx3O35317 434 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Hes2O54792 157 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Dnmt3bO88509 859 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Impdh1P50096 514 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Rpl26P61255 145 aaKnown RBP12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ccdc127Q3TC33 260 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Pdp2Q504M2 532 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Podnl1Q6P3Y9 559 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Mib1Q80SY4 1006 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Gbp5Q8CFB4 590 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 BfarQ8R079 450 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Cox18Q8VC74 331 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ca9Q8VHB5 437 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 AclyQ91V92 1091 aaKnown RBP12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Pqbp1Q91VJ5 263 aaKnown RBP12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ola1Q9CZ30 396 aaKnown RBP12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Anks3Q9CZK6 655 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Gprc5dQ9JIL6 344 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Slamf1Q9QUM4 343 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Bag6Q9Z1R2 1154 aaKnown RBP12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ighv11-2A0A075B5R8 117 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Mtx3D3YTP3 312 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ring1O35730 406 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Pknox1O70477 436 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 PargO88622 969 aaKnown RBP12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Pld2P97813 933 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Fem1cQ8CEF1 617 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Taf10Q8K0H5 218 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Cyp2c50Q91X77 490 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Fbxo32Q9CPU7 355 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 CygbQ9CX80 190 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 SarnpQ9D1J3 210 aaKnown RBP12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Bcas2Q9D287 225 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Q9D454 513 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 1700080O16RikQ9D9G4 284 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Syvn1Q9DBY1 612 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Vmn1r65Q9EPS7 332 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Veph1A1A535 833 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Rabgap1lA6H6A9 815 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Pde9aO70628 534 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Stam2O88811 523 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Eno3P21550 434 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Tas2r16P59529 299 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Fut7Q11131 389 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 B020004J07RikQ3UTC0 476 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Slfn4Q3UV66 602 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 HiraQ61666 1015 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Scube1Q6NZL8 1018 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Stmnd1Q6P3A1 279 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Tlr12Q6QNU9 906 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Olfr412Q7TRW7 312 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Adamts2Q8C9W3 1213 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Tada2aQ8CHV6 443 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Poc5Q9DBS8 558 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ptk2bQ9QVP9 1009 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Tagln3Q9R1Q8 199 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 PapolbQ9WVP6 641 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Vwa8Q8CC88 1905 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Gm5483B2RV77 97 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Xpnpep3B7ZMP1 506 aaKnown RBP12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Olfr220E9Q050 325 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Tpst2O88856 376 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Mapkapk2P49138 386 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ntrk1Q3UFB7 799 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ankrd34bQ3UUF8 508 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Sarm1Q6PDS3 724 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Rxfp4Q7TQP4 414 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Arl5aQ80ZU0 179 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 B3gnt5Q8BGY6 376 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Tyw3Q8BSA9 257 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Vmn1r213Q8R278 384 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Sh3kbp1Q8R550 709 aaKnown RBP12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Rprd1aQ8VDS4 312 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Znf622Q91VY9 476 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Rxfp2Q91ZZ5 737 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Def8Q99J78 448 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Nipsnap3bQ9CQE1 247 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Nde1Q9CZA6 344 aa12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Maged1Q9QYH6 775 aaKnown RBP12.74□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Vmn1r2A2AMT6 306 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ttll9A2APC3 461 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 NuggcD3YWJ0 796 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Olfr620E9PZ66 313 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Gm7073E9QAS1 335 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Gm8444F6XS56 118 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ppm1aP49443 382 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Sem1P60897 70 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Wbp2P97765 261 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 March5Q3KNM2 278 aa12.73□□□□□ -0.37
Rnf4-201ENSMUST00000030992 SbplQ3TUY3 232 aa12.73□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms