RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Scd1P13516 355 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Tap1P21958 724 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Slc6a13P31649 602 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ephx2P34914 554 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ntrk1Q3UFB7 799 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Zyg11bQ3UFS0 744 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Tmem247Q497K7 211 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Cldn11Q60771 207 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Hspa1aQ61696 641 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Rasa4Q6PFQ7 802 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Cd300lfQ6SJQ7 337 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ccdc184Q8BMK5 191 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Mfsd14bQ8CIA9 507 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Adam32Q8K410 754 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Smg8Q8VE18 991 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Slc5a2Q923I7 670 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ecrg4Q99LS0 148 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ddx50Q99MJ9 734 aaKnown RBP10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Decr1Q9CQ62 335 aaKnown RBP10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Dppa5aQ9CQS7 118 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 XpotQ9CRT8 963 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Zdhhc13Q9CWU2 622 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Pbld2Q9CXN7 288 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ccdc77Q9CZH8 489 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Psmd13Q9WVJ2 376 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Cpxm1Q9Z100 722 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 PappaQ8R4K8 1624 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gbp4A4UUI3 631 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Skint6A7XUZ6 1240 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Sult2a6B2RVI8 285 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 1700011I03RikE9PYL8 271 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ptpn9O35239 593 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gas2P11862 314 aaKnown RBP10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Vps26aP40336 327 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 ItgavP43406 1044 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Hdgfl2Q3UMU9 669 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Q810S2 196 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 HnrnpabQ99020 285 aaKnown RBP10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Marc1Q9CW42 340 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Hnrnpa0Q9CX86 305 aaKnown RBP10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Plin3Q9DBG5 437 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 PllpQ9DCU2 182 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 PtsQ9R1Z7 144 aa10.91□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gm4756A0A140LIS8 335 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Cntnap3E9PY62 1287 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gm10719E9Q7T3 227 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 H2-M9O19442 342 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Cd3gP11942 182 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ggnbp1Q6K1E7 370 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Chst10Q6PGK7 356 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Slc18a2Q8BRU6 517 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Pggt1bQ8BUY9 377 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Bclaf1Q8K019 919 aaKnown RBP10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Lrrc56Q8K375 552 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Akr1c20Q8VC77 323 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Eif2b2Q99LD9 351 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Rec114Q9CWH4 259 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Fads3Q9JJE7 449 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 MycsQ9Z304 431 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Icam1P13597 537 aaKnown RBP10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 C1qbP14106 253 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 TktP40142 623 aaKnown RBP10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gabrr2P56476 465 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Rps24P62849 133 aaKnown RBP10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Clec4fP70194 548 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Akr1c6P70694 323 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Htr4P97288 388 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Sh3bp2Q06649 559 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Nutm2Q3V0C3 733 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Q5EBG8 199 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Zfp759Q7M6X3 721 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Mis18bp1Q80WQ8 998 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Fbxl21Q8BFZ4 434 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 TxlngQ8BHN1 524 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ugt2b34Q8K154 532 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Fam151aQ8QZW3 608 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Setd7Q8VHL1 366 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Golm1Q91XA2 393 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Spesp1Q9D5A0 399 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 PgdQ9DCD0 483 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Cdh13Q9WTR5 714 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Vmn2r59E9PUT5 865 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gm6408J3QNG1 320 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Hspa8P63017 646 aaKnown RBP10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Slfn4Q3UV66 602 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Lrrc19Q8BZT5 364 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 WwoxQ91WL8 414 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Commd8Q9CZG3 183 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Arpc5lQ9D898 153 aa10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Rad18Q9QXK2 509 aaKnown RBP10.9□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gm43518A0A0G2JGB6 165 aa10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 Olfr839-ps1A0A1D5RMH6 312 aa10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mknk1O08605 427 aa10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 Igf2bp1O88477 577 aaKnown RBP10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 DdcO88533 480 aa10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 Hcn3O88705 779 aa10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 SykP48025 629 aa10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 Abhd10Q6PE15 297 aa10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 Hmgxb4Q80Y32 594 aaKnown RBP10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 Xylt1Q811B1 953 aa10.9□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms