RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 GBA3Q9H227 469 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 DPH5Q9H2P9 285 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 GAREM1Q9H706 876 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 GLOD4Q9HC38 313 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 TM7SF3Q9NS93 570 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 HAUS2Q9NVX0 235 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 ELOVL2Q9NXB9 296 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 LHX3Q9UBR4 397 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 ERVW-1Q9UQF0 538 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 ATP8A1Q9Y2Q0 1164 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 UTP11Q9Y3A2 253 aaKnown RBP9.5□□□□□ -0.89
PHGDH-228ENST00000641847 PCDHGB2Q9Y5G2 931 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 GOLGA4Q13439 2230 aaKnown RBP9.5□□□□□ -0.89
PHGDH-228ENST00000641847 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.49□□□□□ -0.89
PHGDH-228ENST00000641847 IGHV1OR15-9A0A0B4J2B8 117 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 ESYT3A0FGR9 886 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 MUSKO15146 869 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 SMAD6O43541 496 aaKnown RBP9.49□□□□□ -0.89
PHGDH-228ENST00000641847 TNFSF14O43557 240 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 TIMM44O43615 452 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 ADAM23O75077 832 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 METTL18O95568 372 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 ATXN1LP0C7T5 689 aaKnown RBP9.49□□□□□ -0.89
PHGDH-228ENST00000641847 HSPA9P38646 679 aaKnown RBP9.49□□□□□ -0.89
PHGDH-228ENST00000641847 ADCY8P40145 1251 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 EIF2S3P41091 472 aaKnown RBP9.49□□□□□ -0.89
PHGDH-228ENST00000641847 KIR2DL1P43626 348 aaPredicted RBP9.49□□□□□ -0.89
PHGDH-228ENST00000641847 RGRP47804 291 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 ST8SIA6P61647 398 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 BASP1P80723 227 aaKnown RBP9.49□□□□□ -0.89
PHGDH-228ENST00000641847 SLC20A2Q08357 652 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 PTPRNQ16849 979 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 ERCC6LQ2NKX8 1250 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 INAVAQ3KP66 663 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 FNDC3BQ53EP0 1204 aaKnown RBP9.49□□□□□ -0.89
PHGDH-228ENST00000641847 CCDC157Q569K6 752 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 IZUMO3Q5VZ72 239 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 DUPD1Q68J44 220 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 C22orf39Q6P5X5 142 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 C4orf22Q6V702 233 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 TMPRSS12Q86WS5 348 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 LURAP1LQ8IV03 231 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 ZNF513Q8N8E2 541 aaPredicted RBP9.49□□□□□ -0.89
PHGDH-228ENST00000641847 TSEN2Q8NCE0 465 aaKnown RBP9.49□□□□□ -0.89
PHGDH-228ENST00000641847 MYRIPQ8NFW9 859 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 LRRC45Q96CN5 670 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 SNF8Q96H20 258 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 MGME1Q9BQP7 344 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 TM6SF2Q9BZW4 377 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 CEP44Q9C0F1 390 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 RAB6BQ9NRW1 208 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 DMGDHQ9UI17 866 aaKnown RBP9.49□□□□□ -0.89
PHGDH-228ENST00000641847 CYP8B1Q9UNU6 501 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 SNX24Q9Y343 169 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 AK5Q9Y6K8 562 aa9.49□□□□□ -0.89
PHGDH-228ENST00000641847 TTC24A2A3L6 582 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-228ENST00000641847 TARSL2A2RTX5 802 aaKnown RBP9.48□□□□□ -0.89
PHGDH-228ENST00000641847 FAM149AA5PLN7 773 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 CYSRT1A8MQ03 144 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 ERVH48-1M5A8F1 160 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 DNALI1O14645 258 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-228ENST00000641847 ATP9BO43861 1147 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 SEC31AO94979 1220 aaKnown RBP9.48□□□□□ -0.89
PHGDH-228ENST00000641847 IGSF6O95976 241 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 GSRP00390 522 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 NTRK1P04629 796 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 SRPRAP08240 638 aaKnown RBP9.48□□□□□ -0.89
PHGDH-228ENST00000641847 CDK4P11802 303 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 GABRG2P18507 467 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 ITPKBP27987 946 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 NTSR1P30989 418 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 FDFT1P37268 417 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 NNMTP40261 264 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 RPL21P46778 160 aaKnown RBP9.48□□□□□ -0.89
PHGDH-228ENST00000641847 SEMG2Q02383 582 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 DSC2Q02487 901 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 CAMK2BQ13554 666 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 SEMA5AQ13591 1074 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 PRPSAP1Q14558 356 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 SMAD1Q15797 465 aaKnown RBP9.48□□□□□ -0.89
PHGDH-228ENST00000641847 PARP6Q2NL67 630 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 ACCSLQ4AC99 568 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 ATXN7L2Q5T6C5 722 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-228ENST00000641847 EMC10Q5UCC4 262 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 EGFLAMQ63HQ2 1017 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 ALG1LQ6GMV1 187 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 Q6ZVU0 165 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 SLC41A1Q8IVJ1 513 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 PCDH20Q8N6Y1 951 aaKnown RBP9.48□□□□□ -0.89
PHGDH-228ENST00000641847 SEC14L1Q92503 715 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 MYO19Q96H55 970 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 GDAP1L1Q96MZ0 367 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 FCRL5Q96RD9 977 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 SEMA3CQ99985 751 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 GORASP1Q9BQQ3 440 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 MLPHQ9BV36 600 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-228ENST00000641847 MIR1-1HGQ9H1L0 117 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 SLC25A51Q9H1U9 297 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 TNKS2Q9H2K2 1166 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 ANKZF1Q9H8Y5 726 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms