RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 BLOC1S5Q8TDH9 187 aa16.89■□□□□ 0.3
PHGDH-223ENST00000641597 TRIM4Q9C037 500 aa16.89■□□□□ 0.3
PHGDH-223ENST00000641597 SLC25A51Q9H1U9 297 aa16.89■□□□□ 0.3
PHGDH-223ENST00000641597 GSTO2Q9H4Y5 243 aa16.89■□□□□ 0.3
PHGDH-223ENST00000641597 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.89■□□□□ 0.3
PHGDH-223ENST00000641597 HCSTQ9UBK5 93 aa16.89■□□□□ 0.3
PHGDH-223ENST00000641597 VWA7Q9Y334 891 aa16.89■□□□□ 0.3
PHGDH-223ENST00000641597 A0A087X1B8 175 aa16.89■□□□□ 0.29
PHGDH-223ENST00000641597 PEX1O43933 1283 aa16.89■□□□□ 0.29
PHGDH-223ENST00000641597 BCAS2O75934 225 aaPredicted RBP16.89■□□□□ 0.29
PHGDH-223ENST00000641597 S1PR4O95977 384 aa16.89■□□□□ 0.29
PHGDH-223ENST00000641597 ASGR1P07306 291 aa16.89■□□□□ 0.29
PHGDH-223ENST00000641597 ZNF135P52742 658 aaPredicted RBP16.89■□□□□ 0.29
PHGDH-223ENST00000641597 FBXL22Q6P050 247 aa16.89■□□□□ 0.29
PHGDH-223ENST00000641597 ZNF549Q6P9A3 640 aa16.89■□□□□ 0.29
PHGDH-223ENST00000641597 ISCA2Q86U28 154 aa16.89■□□□□ 0.29
PHGDH-223ENST00000641597 ZNF683Q8IZ20 524 aa16.89■□□□□ 0.29
PHGDH-223ENST00000641597 THEM5Q8N1Q8 247 aa16.89■□□□□ 0.29
PHGDH-223ENST00000641597 NMD3Q96D46 503 aaKnown RBP16.89■□□□□ 0.29
PHGDH-223ENST00000641597 SUSD3Q96L08 255 aa16.89■□□□□ 0.29
PHGDH-223ENST00000641597 UBXN10Q96LJ8 280 aa16.89■□□□□ 0.29
PHGDH-223ENST00000641597 SP110Q9HB58 689 aa16.89■□□□□ 0.29
PHGDH-223ENST00000641597 CACNA2D2Q9NY47 1150 aa16.89■□□□□ 0.29
PHGDH-223ENST00000641597 HEATR9A2RTY3 570 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 AP3B1O00203 1094 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 UBDO15205 165 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 TADA2AO75478 443 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 CYP2C18P33260 490 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 LEPRP48357 1165 aaKnown RBP16.88■□□□□ 0.29
PHGDH-223ENST00000641597 ZNF157P51786 506 aaPredicted RBP16.88■□□□□ 0.29
PHGDH-223ENST00000641597 TIAL1Q01085 375 aaKnown RBP eCLIP16.88■□□□□ 0.29
PHGDH-223ENST00000641597 GRM2Q14416 872 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 PTPRRQ15256 657 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 GPR162Q16538 588 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 REP15Q6BDI9 236 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 RTN4RL1Q86UN2 441 aaPredicted RBP16.88■□□□□ 0.29
PHGDH-223ENST00000641597 LZTR1Q8N653 840 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 DNAJC1Q96KC8 554 aaKnown RBP16.88■□□□□ 0.29
PHGDH-223ENST00000641597 RPL10LQ96L21 214 aaKnown RBP16.88■□□□□ 0.29
PHGDH-223ENST00000641597 CYP2S1Q96SQ9 504 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 VCX3BQ9H321 246 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 C6orf203Q9P0P8 240 aaPredicted RBP16.88■□□□□ 0.29
PHGDH-223ENST00000641597 PSMD12O00232 456 aaPredicted RBP16.88■□□□□ 0.29
PHGDH-223ENST00000641597 TRPA1O75762 1119 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 ALDOCP09972 364 aaKnown RBP16.88■□□□□ 0.29
PHGDH-223ENST00000641597 CHRM3P20309 590 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 TBX4P57082 545 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 PRAMEP78395 509 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 MYBPC1Q00872 1141 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 CAP1Q01518 475 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 DSC3Q14574 896 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 TIGD7Q6NT04 549 aaPredicted RBP16.88■□□□□ 0.29
PHGDH-223ENST00000641597 AMIGO2Q86SJ2 522 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 METTL25Q8N6Q8 603 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 ARRDC2Q8TBH0 407 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 PIP4K2CQ8TBX8 421 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 LRTOMTQ8WZ04 291 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 MRPL1Q9BYD6 325 aaKnown RBP16.88■□□□□ 0.29
PHGDH-223ENST00000641597 ATP13A1Q9HD20 1204 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 TBC1D13Q9NVG8 400 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 POLR3BQ9NW08 1133 aaPredicted RBP16.88■□□□□ 0.29
PHGDH-223ENST00000641597 TBC1D30Q9Y2I9 924 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 TRAF6Q9Y4K3 522 aa16.88■□□□□ 0.29
PHGDH-223ENST00000641597 PRSS51A0A1B0GVH4 220 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 TRPC5OSA6NMA1 111 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 SLCO1B7G3V0H7 640 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 H3BMM5 538 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 LDB2O43679 373 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 ZNF623O75123 536 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 IGHA2P01877 340 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 ATXN1LP0C7T5 689 aaKnown RBP16.87■□□□□ 0.29
PHGDH-223ENST00000641597 DNAJB2P25686 324 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 SH3BP2P78314 561 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 ECT2LQ008S8 904 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 LRP8Q14114 963 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 AGAP9Q5VTM2 703 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 TMEM102Q8N9M5 508 aaPredicted RBP16.87■□□□□ 0.29
PHGDH-223ENST00000641597 GRIN3AQ8TCU5 1115 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 NAT14Q8WUY8 206 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 NSMCE3Q96MG7 304 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 SEMA3CQ99985 751 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 RRAGCQ9HB90 399 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 Q9Y3F1 56 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 CAPN15O75808 1086 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 RPL10P27635 214 aaKnown RBP16.87■□□□□ 0.29
PHGDH-223ENST00000641597 OR1G1P47890 313 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 KCNA10Q16322 511 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 RARS2Q5T160 578 aaKnown RBP16.87■□□□□ 0.29
PHGDH-223ENST00000641597 CHSY3Q70JA7 882 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 RETREG3Q86VR2 466 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 TICAM1Q8IUC6 712 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 SLC39A13Q96H72 371 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 EXOC2Q96KP1 924 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 ZIC5Q96T25 663 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 CRISPLD1Q9H336 500 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 MEAF6Q9HAF1 191 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 PRDM5Q9NQX1 630 aaPredicted RBP16.87■□□□□ 0.29
PHGDH-223ENST00000641597 VPS45Q9NRW7 570 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 RGS18Q9NS28 235 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 IKZF3Q9UKT9 509 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms