RNA–Protein interactions for RNA: ENST00000641458.1

RGPD1-206, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 BASIC

Gene RGPD1, Length 5,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-206ENST00000641458 TRIM23P36406 574 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 NEK3P51956 506 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 LIMK2P53671 638 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 IRX1P78414 480 aaPredicted RBP6.22□□□□□ -1.41
RGPD1-206ENST00000641458 TIAL1Q01085 375 aaKnown RBP eCLIP6.22□□□□□ -1.41
RGPD1-206ENST00000641458 DMPKQ09013 629 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 GALNT1Q10472 559 aaPredicted RBP6.22□□□□□ -1.41
RGPD1-206ENST00000641458 RWDD4Q6NW29 188 aaKnown RBP6.22□□□□□ -1.41
RGPD1-206ENST00000641458 CERS2Q96G23 380 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 FCRL3Q96P31 734 aaPredicted RBP6.22□□□□□ -1.41
RGPD1-206ENST00000641458 SEMA3CQ99985 751 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 ACBD3Q9H3P7 528 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 PREBQ9HCU5 417 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 PRMT8Q9NR22 394 aaPredicted RBP6.22□□□□□ -1.41
RGPD1-206ENST00000641458 SMYD2Q9NRG4 433 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 NPIPB8E9PQR5 432 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 SPECC1L-ADORA2AF8WAN1 911 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 SMAD6O43541 496 aaKnown RBP6.22□□□□□ -1.41
RGPD1-206ENST00000641458 OPA1O60313 960 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 ARSAP15289 507 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 NFKB2Q00653 900 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 SLC29A2Q14542 456 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 UGP2Q16851 508 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 LONRF1Q17RB8 773 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 BCL7AQ4VC05 210 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 HENMT1Q5T8I9 393 aaKnown RBP6.22□□□□□ -1.41
RGPD1-206ENST00000641458 ZSWIM9Q86XI8 627 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 CCDC114Q96M63 670 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 MMP17Q9ULZ9 603 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 MED16Q9Y2X0 877 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 WNT6Q9Y6F9 365 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 RPP40O75818 363 aaKnown RBP6.22□□□□□ -1.41
RGPD1-206ENST00000641458 KAT7O95251 611 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 CRTAMO95727 393 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 CTSLP07711 333 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 CHRNB1P11230 501 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 C5AR1P21730 350 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 GLDCP23378 1020 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 SERPINA4P29622 427 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 CCR5P51681 352 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 DYNLT1P63172 113 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 MACC1Q6ZN28 852 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 SYT13Q7L8C5 426 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 CFAP52Q8N1V2 620 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 OXR1Q8N573 874 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 FBXO36Q8NEA4 188 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 DDHD1Q8NEL9 900 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 DDI1Q8WTU0 396 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 UCMAQ8WVF2 138 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 CELF6Q96J87 481 aaKnown RBP6.22□□□□□ -1.41
RGPD1-206ENST00000641458 RBBP8Q99708 897 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 C1QTNF1Q9BXJ1 281 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 STMN4Q9H169 189 aaPredicted RBP6.22□□□□□ -1.41
RGPD1-206ENST00000641458 RHOJQ9H4E5 214 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 RAI2Q9Y5P3 530 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 PIKFYVEQ9Y2I7 2098 aa6.22□□□□□ -1.41
RGPD1-206ENST00000641458 SERTM1A2A2V5 107 aa6.21□□□□□ -1.41
RGPD1-206ENST00000641458 PLRG1O43660 514 aaKnown RBP6.21□□□□□ -1.41
RGPD1-206ENST00000641458 RFPL1O75677 317 aa6.21□□□□□ -1.41
RGPD1-206ENST00000641458 GJA1P17302 382 aa6.21□□□□□ -1.41
RGPD1-206ENST00000641458 POLR2EP19388 210 aaKnown RBP6.21□□□□□ -1.41
RGPD1-206ENST00000641458 VIPR2P41587 438 aa6.21□□□□□ -1.41
RGPD1-206ENST00000641458 SSR1P43307 286 aaKnown RBP6.21□□□□□ -1.41
RGPD1-206ENST00000641458 MRPL19P49406 292 aaKnown RBP6.21□□□□□ -1.41
RGPD1-206ENST00000641458 PRKAA2P54646 552 aa6.21□□□□□ -1.41
RGPD1-206ENST00000641458 DSC2Q02487 901 aa6.21□□□□□ -1.41
RGPD1-206ENST00000641458 AAK1Q2M2I8 961 aa6.21□□□□□ -1.41
RGPD1-206ENST00000641458 ADAMTSL4Q6UY14 1074 aa6.21□□□□□ -1.41
RGPD1-206ENST00000641458 GABPB2Q8TAK5 448 aaPredicted RBP6.21□□□□□ -1.41
RGPD1-206ENST00000641458 NACA2Q9H009 215 aa6.21□□□□□ -1.41
RGPD1-206ENST00000641458 PIDD1Q9HB75 910 aa6.21□□□□□ -1.41
RGPD1-206ENST00000641458 TMCO1Q9UM00 188 aa6.21□□□□□ -1.41
RGPD1-206ENST00000641458 LAMA2P24043 3122 aaKnown RBP6.21□□□□□ -1.41
RGPD1-206ENST00000641458 SNAP91O60641 907 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 TIMP2P16035 220 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 DRD3P35462 400 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 PEX6Q13608 980 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 SETMARQ53H47 684 aaPredicted RBP6.21□□□□□ -1.42
RGPD1-206ENST00000641458 SPDYAQ5MJ70 313 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 CILP2Q8IUL8 1156 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 MDGA1Q8NFP4 955 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 ATP6V1G3Q96LB4 118 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 C1QTNF2Q9BXJ5 285 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 EPC1Q9H2F5 836 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 CNOT10Q9H9A5 744 aaKnown RBP6.21□□□□□ -1.42
RGPD1-206ENST00000641458 PRSS16Q9NQE7 514 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 PSMC3IPQ9P2W1 217 aaPredicted RBP6.21□□□□□ -1.42
RGPD1-206ENST00000641458 SORCS3Q9UPU3 1222 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 ANKRD6Q9Y2G4 727 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 ESYT3A0FGR9 886 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 TSPAN6O43657 245 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 MOCS2O96007 188 aaPredicted RBP6.21□□□□□ -1.42
RGPD1-206ENST00000641458 MT-CO1P00395 513 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 SOD1P00441 154 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 PRKCGP05129 697 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 VIPR1P32241 457 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 CDKL1Q00532 357 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 SFSWAPQ12872 951 aaKnown RBP6.21□□□□□ -1.42
RGPD1-206ENST00000641458 ZNF234Q14588 700 aa6.21□□□□□ -1.42
RGPD1-206ENST00000641458 ZNF235Q14590 738 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms