RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 CORO1BQ9BR76 489 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 ADGRE3Q9BY15 652 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 WWP1Q9H0M0 922 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 SAR1AQ9NR31 198 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 RAI2Q9Y5P3 530 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 C2orf71A6NGG8 1288 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 CCL16O15467 120 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 ITM2AO43736 263 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 TRIM13O60858 407 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 KLHL2O95198 593 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 FGF19O95750 216 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 ATP5BP06576 529 aaKnown RBP12.29□□□□□ -0.44
PAX6-261ENST00000639943 CSKP41240 450 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 PLPP4Q5VZY2 271 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 MRNIPQ6NTE8 343 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 LINGO4Q6UY18 593 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 ZYG11AQ6WRX3 759 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 UBE2Q1Q7Z7E8 422 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 CLNKQ7Z7G1 428 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 TTC16Q8NEE8 873 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 PIWIL2Q8TC59 973 aaKnown RBP12.29□□□□□ -0.44
PAX6-261ENST00000639943 SKA1Q96BD8 255 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 KLHL29Q96CT2 875 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 ALG14Q96F25 216 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 NSMCE3Q96MG7 304 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 TUBB6Q9BUF5 446 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 FAM96AQ9H5X1 160 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 SLC40A1Q9NP59 571 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 VPS51Q9UID3 782 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 HELZP42694 1942 aaKnown RBP12.29□□□□□ -0.44
PAX6-261ENST00000639943 ALPK3Q96L96 1907 aa12.29□□□□□ -0.44
PAX6-261ENST00000639943 MKI67P46013 3256 aaKnown RBP12.29□□□□□ -0.44
PAX6-261ENST00000639943 TMEM114B3SHH9 223 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 S1PR4O95977 384 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 GOT2P00505 430 aaKnown RBP12.28□□□□□ -0.44
PAX6-261ENST00000639943 KITP10721 976 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 TAF1AQ15573 450 aaPredicted RBP12.28□□□□□ -0.44
PAX6-261ENST00000639943 LRRC8EQ6NSJ5 796 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 NCEH1Q6PIU2 408 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 TBC1D1Q86TI0 1168 aaPredicted RBP12.28□□□□□ -0.44
PAX6-261ENST00000639943 RNF135Q8IUD6 432 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 BBS7Q8IWZ6 715 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 CENPLQ8N0S6 344 aaPredicted RBP12.28□□□□□ -0.44
PAX6-261ENST00000639943 TTC8Q8TAM2 541 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 HERVK_113Q902F9 699 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 C2orf49Q9BVC5 232 aaPredicted RBP12.28□□□□□ -0.44
PAX6-261ENST00000639943 NLE1Q9NVX2 485 aaPredicted RBP12.28□□□□□ -0.44
PAX6-261ENST00000639943 OXSMQ9NWU1 459 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 DNMT3BQ9UBC3 853 aaKnown RBP12.28□□□□□ -0.44
PAX6-261ENST00000639943 CORO1CQ9ULV4 474 aaPredicted RBP12.28□□□□□ -0.44
PAX6-261ENST00000639943 DNAJC16Q9Y2G8 782 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 RWDD3Q9Y3V2 267 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 DOCK6Q96HP0 2047 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 C2orf81A6NN90 581 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 HIDE1A8MVS5 230 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 LEFTY2O00292 366 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 CCL22O00626 93 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 AURKAO14965 403 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 CD3EAPO15446 510 aaKnown RBP12.28□□□□□ -0.44
PAX6-261ENST00000639943 LYPLA1O75608 230 aaPredicted RBP12.28□□□□□ -0.44
PAX6-261ENST00000639943 PRLP01236 227 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 PIRTP0C851 137 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 DDX6P26196 483 aaKnown RBP eCLIP12.28□□□□□ -0.44
PAX6-261ENST00000639943 SERPINB3P29508 390 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 AQP5P55064 265 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 RHOAP61586 193 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 ZNF789Q5FWF6 425 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 RBM20Q5T481 1227 aaKnown RBP12.28□□□□□ -0.44
PAX6-261ENST00000639943 RETSATQ6NUM9 610 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 SDCCAG8Q86SQ7 713 aaPredicted RBP12.28□□□□□ -0.44
PAX6-261ENST00000639943 WFDC5Q8TCV5 224 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 SLC22A17Q8WUG5 538 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 SLC46A2Q9BY10 475 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 STN1Q9H668 368 aaKnown RBP12.28□□□□□ -0.44
PAX6-261ENST00000639943 CPSF2Q9P2I0 782 aaKnown RBP12.28□□□□□ -0.44
PAX6-261ENST00000639943 LHX3Q9UBR4 397 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 MARCOQ9UEW3 520 aaPredicted RBP12.28□□□□□ -0.44
PAX6-261ENST00000639943 VWA7Q9Y334 891 aa12.28□□□□□ -0.44
PAX6-261ENST00000639943 CCDC162PA2VCL2 907 aa12.27□□□□□ -0.44
PAX6-261ENST00000639943 GJA1P17302 382 aa12.27□□□□□ -0.44
PAX6-261ENST00000639943 HOXB8P17481 243 aaPredicted RBP12.27□□□□□ -0.44
PAX6-261ENST00000639943 OGNP20774 298 aaKnown RBP12.27□□□□□ -0.44
PAX6-261ENST00000639943 PSMA3P25788 255 aa12.27□□□□□ -0.44
PAX6-261ENST00000639943 RASSF2P50749 326 aa12.27□□□□□ -0.44
PAX6-261ENST00000639943 CLCN4P51793 760 aa12.27□□□□□ -0.44
PAX6-261ENST00000639943 ZNF140P52738 457 aaPredicted RBP12.27□□□□□ -0.44
PAX6-261ENST00000639943 ZNF460Q14592 562 aa12.27□□□□□ -0.44
PAX6-261ENST00000639943 HECTD2Q5U5R9 776 aa12.27□□□□□ -0.44
PAX6-261ENST00000639943 ASRGL1Q7L266 308 aa12.27□□□□□ -0.44
PAX6-261ENST00000639943 GLT6D1Q7Z4J2 308 aa12.27□□□□□ -0.44
PAX6-261ENST00000639943 FSTL5Q8N475 847 aaPredicted RBP12.27□□□□□ -0.44
PAX6-261ENST00000639943 TMEM151AQ8N4L1 468 aa12.27□□□□□ -0.44
PAX6-261ENST00000639943 LPCAT1Q8NF37 534 aa12.27□□□□□ -0.44
PAX6-261ENST00000639943 OR13C4Q8NGS5 318 aa12.27□□□□□ -0.44
PAX6-261ENST00000639943 OR4L1Q8NH43 312 aa12.27□□□□□ -0.44
PAX6-261ENST00000639943 POF1BQ8WVV4 589 aa12.27□□□□□ -0.44
PAX6-261ENST00000639943 SCG3Q8WXD2 468 aaKnown RBP12.27□□□□□ -0.44
PAX6-261ENST00000639943 BHMTQ93088 406 aa12.27□□□□□ -0.44
PAX6-261ENST00000639943 ACDQ96AP0 544 aa12.27□□□□□ -0.44
PAX6-261ENST00000639943 NXNL1Q96CM4 212 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms