RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 HMGA1P17096 107 aaKnown RBP13.94□□□□□ -0.18
ATRIP-208ENST00000639561 AVPR1AP37288 418 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 MAPKAPK2P49137 400 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 KPNA1P52294 538 aaPredicted RBP13.94□□□□□ -0.18
ATRIP-208ENST00000639561 IL10RBQ08334 325 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 ZNF460Q14592 562 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 USP10Q14694 798 aaKnown RBP13.94□□□□□ -0.18
ATRIP-208ENST00000639561 ZNF470Q6ECI4 717 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 KIAA0930Q6ICG6 404 aaPredicted RBP13.94□□□□□ -0.18
ATRIP-208ENST00000639561 SLC41A1Q8IVJ1 513 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.94□□□□□ -0.18
ATRIP-208ENST00000639561 PIWIL2Q8TC59 973 aaKnown RBP13.94□□□□□ -0.18
ATRIP-208ENST00000639561 NMRAL1Q9HBL8 299 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 NOD2Q9HC29 1040 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 AFF4Q9UHB7 1163 aaKnown RBP13.94□□□□□ -0.18
ATRIP-208ENST00000639561 LNPEPQ9UIQ6 1025 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 DNMT3LQ9UJW3 386 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 MUC6Q6W4X9 2439 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.94□□□□□ -0.18
ATRIP-208ENST00000639561 ANHXE9PGG2 379 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 F5H5T6 163 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 AURKAO14965 403 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 COCHO43405 550 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 PRAMEF11O60813 436 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 PDGFBP01127 241 aaPredicted RBP13.94□□□□□ -0.18
ATRIP-208ENST00000639561 SRFP11831 508 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 ATP5C1P36542 298 aaKnown RBP13.94□□□□□ -0.18
ATRIP-208ENST00000639561 SERPINH1P50454 418 aaKnown RBP13.94□□□□□ -0.18
ATRIP-208ENST00000639561 NTHL1P78549 312 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 CDK18Q07002 472 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 HTR4Q13639 388 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 LBRQ14739 615 aaKnown RBP13.94□□□□□ -0.18
ATRIP-208ENST00000639561 C5orf22Q49AR2 442 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 NAPRTQ6XQN6 538 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 RAPH1Q70E73 1250 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 MAVSQ7Z434 540 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 CEP97Q8IW35 865 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 ELMOD1Q8N336 334 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 TMEM151AQ8N4L1 468 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 MIPEPQ99797 713 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 WWP1Q9H0M0 922 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 PDFQ9HBH1 243 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 CYP4F11Q9HBI6 524 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 CPSF2Q9P2I0 782 aaKnown RBP13.94□□□□□ -0.18
ATRIP-208ENST00000639561 UXTQ9UBK9 157 aaPredicted RBP13.94□□□□□ -0.18
ATRIP-208ENST00000639561 ACTL7AQ9Y615 435 aa13.94□□□□□ -0.18
ATRIP-208ENST00000639561 NOTCH4Q99466 2003 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 TK2O00142 265 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 ACSL4O60488 711 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 SBK3P0C264 359 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 ATXN1LP0C7T5 689 aaKnown RBP13.93□□□□□ -0.18
ATRIP-208ENST00000639561 PTPN2P17706 415 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 GRK2P25098 689 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 HADHAP40939 763 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 TUFMP49411 452 aaKnown RBP13.93□□□□□ -0.18
ATRIP-208ENST00000639561 CLCN5P51795 746 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 YBEYP58557 167 aaPredicted RBP13.93□□□□□ -0.18
ATRIP-208ENST00000639561 NHLH1Q02575 133 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 ACBD5Q5T8D3 534 aaPredicted RBP13.93□□□□□ -0.18
ATRIP-208ENST00000639561 SNX30Q5VWJ9 437 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 FAM91A1Q658Y4 838 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 ASTLQ6HA08 431 aaPredicted RBP13.93□□□□□ -0.18
ATRIP-208ENST00000639561 CENPLQ8N0S6 344 aaPredicted RBP13.93□□□□□ -0.18
ATRIP-208ENST00000639561 SLC44A3Q8N4M1 653 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 PNPLA1Q8N8W4 532 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 C2CD4AQ8NCU7 369 aaPredicted RBP13.93□□□□□ -0.18
ATRIP-208ENST00000639561 PRSS33Q8NF86 280 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 OR13J1Q8NGT2 312 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 PRICKLE1Q96MT3 831 aaPredicted RBP13.93□□□□□ -0.18
ATRIP-208ENST00000639561 DNMT3BQ9UBC3 853 aaKnown RBP13.93□□□□□ -0.18
ATRIP-208ENST00000639561 WNT16Q9UBV4 365 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 INSL5Q9Y5Q6 135 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 HEATR9A2RTY3 570 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 CAPN14A8MX76 684 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 KLKB1P03952 638 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 HOXD9P28356 352 aaPredicted RBP13.93□□□□□ -0.18
ATRIP-208ENST00000639561 PTPN4P29074 926 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 HARS2P49590 506 aaKnown RBP13.93□□□□□ -0.18
ATRIP-208ENST00000639561 RPS24P62847 133 aaKnown RBP13.93□□□□□ -0.18
ATRIP-208ENST00000639561 UGP2Q16851 508 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 SIRPB2Q5JXA9 342 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 TREML1Q86YW5 311 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 SPNS2Q8IVW8 549 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 NSMCE1Q8WV22 266 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 FGF13Q92913 245 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 SEMA3CQ99985 751 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 NACA2Q9H009 215 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 PNPOQ9NVS9 261 aa13.93□□□□□ -0.18
ATRIP-208ENST00000639561 MRPS23Q9Y3D9 190 aaKnown RBP13.93□□□□□ -0.18
ATRIP-208ENST00000639561 ZDBF2Q9HCK1 2354 aa13.92□□□□□ -0.18
ATRIP-208ENST00000639561 FAM95CA0A1B0GW59 222 aa13.92□□□□□ -0.18
ATRIP-208ENST00000639561 PAMP19021 973 aa13.92□□□□□ -0.18
ATRIP-208ENST00000639561 HOXD11P31277 338 aaPredicted RBP13.92□□□□□ -0.18
ATRIP-208ENST00000639561 RASSF2P50749 326 aa13.92□□□□□ -0.18
ATRIP-208ENST00000639561 ABCE1P61221 599 aaKnown RBP13.92□□□□□ -0.18
ATRIP-208ENST00000639561 PLD1Q13393 1074 aa13.92□□□□□ -0.18
ATRIP-208ENST00000639561 TUBB3Q13509 450 aa13.92□□□□□ -0.18
ATRIP-208ENST00000639561 THOC5Q13769 683 aaKnown RBP13.92□□□□□ -0.18
ATRIP-208ENST00000639561 KRT72Q14CN4 511 aa13.92□□□□□ -0.18
ATRIP-208ENST00000639561 ZNF789Q5FWF6 425 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms