RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 USE1Q9NZ43 259 aa16.71■□□□□ 0.26
SCARB2-210ENST00000638567 FZD10Q9ULW2 581 aa16.71■□□□□ 0.26
SCARB2-210ENST00000638567 RAB26Q9ULW5 256 aa16.71■□□□□ 0.26
SCARB2-210ENST00000638567 COL1A2P08123 1366 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 MYBPHLA2RUH7 354 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 KRT75O95678 551 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 PRDX6P30041 224 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 CD52P31358 61 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 RPL9P32969 192 aaKnown RBP16.7■□□□□ 0.26
SCARB2-210ENST00000638567 ATP5C1P36542 298 aaKnown RBP16.7■□□□□ 0.26
SCARB2-210ENST00000638567 ZNF284Q2VY69 593 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 STK40Q8N2I9 435 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 FAXDC2Q96IV6 333 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 TM6SF2Q9BZW4 377 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 IGSF9Q9P2J2 1179 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 KLF11O14901 512 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 LRG1P02750 347 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 MMP3P08254 477 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 EIF2B2P49770 351 aaKnown RBP16.7■□□□□ 0.26
SCARB2-210ENST00000638567 LSM3P62310 102 aaKnown RBP16.7■□□□□ 0.26
SCARB2-210ENST00000638567 MOGSQ13724 837 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 PSMD5Q16401 504 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 ARHGAP17Q68EM7 881 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 FAM81AQ8TBF8 368 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 ASB8Q9H765 288 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 AGO3Q9H9G7 860 aaKnown RBP16.7■□□□□ 0.26
SCARB2-210ENST00000638567 EIF2B3Q9NR50 452 aaKnown RBP16.7■□□□□ 0.26
SCARB2-210ENST00000638567 TIMM22Q9Y584 194 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 SMIM35A0A1B0GVV1 85 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 NEMP2A6NFY4 417 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 ULK1O75385 1050 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 TTPAP49638 278 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 PLCL1Q15111 1095 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 DCBLD1Q8N8Z6 715 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 MED8Q96G25 268 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 SNX27Q96L92 541 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 C12orf42Q96LP6 360 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 TBATAQ96M53 351 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 CDK5RAP1Q96SZ6 601 aaKnown RBP16.7■□□□□ 0.26
SCARB2-210ENST00000638567 UNC93B1Q9H1C4 597 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 ATXN10Q9UBB4 475 aa16.7■□□□□ 0.26
SCARB2-210ENST00000638567 USP2O75604 605 aaPredicted RBP16.69■□□□□ 0.26
SCARB2-210ENST00000638567 DLDP09622 509 aaKnown RBP16.69■□□□□ 0.26
SCARB2-210ENST00000638567 CCDC159P0C7I6 412 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 RAP1GDS1P52306 607 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 ATP6V0D1P61421 351 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 BCL2L1Q07817 233 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 DPYSQ14117 519 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 PPP1R15BQ5SWA1 713 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 AFTPHQ6ULP2 937 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 SVOPQ8N4V2 548 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 HEXDCQ8WVB3 486 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 HOPXQ9BPY8 73 aaPredicted RBP16.69■□□□□ 0.26
SCARB2-210ENST00000638567 MLPHQ9BV36 600 aaPredicted RBP16.69■□□□□ 0.26
SCARB2-210ENST00000638567 PLGRKTQ9HBL7 147 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 ZNHIT2Q9UHR6 403 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 SLC27A5Q9Y2P5 690 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 LRRC42Q9Y546 428 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 TREHO43280 583 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 SLC22A3O75751 556 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 FGF1P05230 155 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 ALOX15P16050 662 aaPredicted RBP16.69■□□□□ 0.26
SCARB2-210ENST00000638567 RRM2P31350 389 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 SOX6P35712 828 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 ST13P50502 369 aaKnown RBP16.69■□□□□ 0.26
SCARB2-210ENST00000638567 GALK1P51570 392 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 PSMD7P51665 324 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 HSPA14Q0VDF9 509 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 STARD3Q14849 445 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 SYPL2Q5VXT5 272 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 HOMEZQ8IX15 550 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 GALNT15Q8N3T1 639 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 OR2T34Q8NGX1 318 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 OR2T3Q8NH03 318 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 LRTOMTQ8WZ04 291 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 PCED1BQ96HM7 432 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 TEKT5Q96M29 485 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 OR52B2Q96RD2 323 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 PEBP4Q96S96 227 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 HMG20AQ9NP66 347 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 C3orf18Q9UK00 162 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 TCAF1Q9Y4C2 921 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 NTRK1P04629 796 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 EPS8Q12929 822 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 TRIM25Q14258 630 aaKnown RBP16.69■□□□□ 0.26
SCARB2-210ENST00000638567 ZNF618Q5T7W0 954 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 NCBP2-AS2Q69YL0 99 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 ANKS3Q6ZW76 656 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 TMEM110Q86TL2 294 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 PPM1MQ96MI6 270 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 PANX3Q96QZ0 392 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 H2AFY2Q9P0M6 372 aaPredicted RBP16.69■□□□□ 0.26
SCARB2-210ENST00000638567 STYXL1Q9Y6J8 313 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 RGPD5Q99666 1765 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 TRMUO75648 421 aaKnown RBP16.69■□□□□ 0.26
SCARB2-210ENST00000638567 GPC1P35052 558 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 DAOAP59103 153 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 INTS6LQ5JSJ4 861 aaKnown RBP16.69■□□□□ 0.26
SCARB2-210ENST00000638567 TAC4Q86UU9 113 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 CBR4Q8N4T8 237 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms