RNA–Protein interactions for RNA: ENST00000638506.1

KCNMA1-236, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-236ENST00000638506 ACAD11Q709F0 780 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 NECAB2Q7Z6G3 386 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 GALNT7Q86SF2 657 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 CILP2Q8IUL8 1156 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 TXNDC5Q8NBS9 432 aaKnown RBP13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 ACTRT2Q8TDY3 377 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 C2orf15Q8WU43 125 aaKnown RBP13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 HDAC10Q969S8 669 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 TSPAN17Q96FV3 270 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 TTPALQ9BTX7 342 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 OSBPL1AQ9BXW6 950 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 NUF2Q9BZD4 464 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 POLR1EQ9GZS1 481 aaKnown RBP13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 MFSD1Q9H3U5 465 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 ANGPTL2Q9UKU9 493 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 WASF2Q9Y6W5 498 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 CEP290O15078 2479 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 LTBP2Q14767 1821 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 F5H5T6 163 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 CCL22O00626 93 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 CCNT2O60583 730 aaKnown RBP13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 ZMPSTE24O75844 475 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 GALTP07902 379 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 ITGAXP20702 1163 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 PRAMEP78395 509 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 MTA1Q13330 715 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 ZNF235Q14590 738 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 SLC5A9Q2M3M2 681 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 HECTD2Q5U5R9 776 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 AGAP9Q5VTM2 703 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 CWF19L1Q69YN2 538 aaKnown RBP13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 TRIM68Q6AZZ1 485 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 PGM2L1Q6PCE3 622 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 PRSS55Q6UWB4 352 aaPredicted RBP13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 OTOP2Q7RTS6 562 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 RNF135Q8IUD6 432 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 LGI2Q8N0V4 545 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 PNPLA1Q8N8W4 532 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 SHKBP1Q8TBC3 707 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 STON2Q8WXE9 905 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 ITFG2Q969R8 447 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 IFT43Q96FT9 208 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 LENG8Q96PV6 779 aaPredicted RBP13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 TMEM106CQ9BVX2 250 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 POMKQ9H5K3 350 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 GPAMQ9HCL2 828 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 NCKIPSDQ9NZQ3 722 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 ARHGAP26Q9UNA1 814 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 CDYLQ9Y232 598 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 SSX2IPQ9Y2D8 614 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 KCTD3Q9Y597 815 aa13.69□□□□□ -0.22
KCNMA1-236ENST00000638506 MUSKO15146 869 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 LDB2O43679 373 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 GJB3O75712 270 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 TIMP1P01033 207 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 LTA4HP09960 611 aaKnown RBP13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 RAG1P15918 1043 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 ATF6P18850 670 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 SERPINB5P36952 375 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 PEX6Q13608 980 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 IKBKEQ14164 716 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 SLC14A2Q15849 920 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 TECRLQ5HYJ1 363 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 TRIM67Q6ZTA4 783 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 PIWIL4Q7Z3Z4 852 aaKnown RBP13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 DEFB107AQ8IZN7 70 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 CFAP52Q8N1V2 620 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 ZFAND2BQ8WV99 257 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 SCG3Q8WXD2 468 aaKnown RBP13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 FEM1CQ96JP0 617 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 CNDP1Q96KN2 507 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 TMEM175Q9BSA9 504 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 RTKNQ9BST9 563 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 CCDC28BQ9BUN5 200 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 YIPF3Q9GZM5 350 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 CYP4F11Q9HBI6 524 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 VWA7Q9Y334 891 aa13.68□□□□□ -0.22
KCNMA1-236ENST00000638506 GREB1Q4ZG55 1949 aa13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 NEMP2A6NFY4 417 aa13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 HOXA2O43364 376 aa13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 S1PR4O95977 384 aa13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 CCDC166P0CW27 439 aa13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 THRAP10827 490 aa13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 ACADSP16219 412 aa13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 PIK3R1P27986 724 aa13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 ERFP50548 548 aa13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 EPHB1P54762 984 aa13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 AP2B1P63010 937 aa13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 PFKPQ01813 784 aa13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 ROR2Q01974 943 aaKnown RBP13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 BTKQ06187 659 aa13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 NSUN2Q08J23 767 aaKnown RBP eCLIP13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 ZRSR2Q15696 482 aaKnown RBP13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 KLC3Q6P597 504 aa13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 CNKSR3Q6P9H4 555 aa13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 C16orf59Q7L2K0 433 aa13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 LDB1Q86U70 411 aaPredicted RBP13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 SPNS2Q8IVW8 549 aa13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 LMNTD2Q8IXW0 634 aa13.67□□□□□ -0.22
KCNMA1-236ENST00000638506 CPSF7Q8N684 471 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms