RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 P2RY13Q9BPV8 354 aa11.83□□□□□ -0.52
CLN6-223ENST00000637823 OSBPL1AQ9BXW6 950 aa11.83□□□□□ -0.52
CLN6-223ENST00000637823 ZDHHC6Q9H6R6 413 aa11.83□□□□□ -0.52
CLN6-223ENST00000637823 C8orf33Q9H7E9 229 aaPredicted RBP11.83□□□□□ -0.52
CLN6-223ENST00000637823 MAGEE1Q9HCI5 957 aa11.83□□□□□ -0.52
CLN6-223ENST00000637823 PPANQ9NQ55 473 aaKnown RBP11.83□□□□□ -0.52
CLN6-223ENST00000637823 SMYD2Q9NRG4 433 aa11.83□□□□□ -0.52
CLN6-223ENST00000637823 C20orf96Q9NUD7 363 aaPredicted RBP11.83□□□□□ -0.52
CLN6-223ENST00000637823 EURLQ9NYK6 297 aa11.83□□□□□ -0.52
CLN6-223ENST00000637823 ZNF180Q9UJW8 692 aa11.83□□□□□ -0.52
CLN6-223ENST00000637823 PHTF1Q9UMS5 762 aa11.83□□□□□ -0.52
CLN6-223ENST00000637823 PPIL1Q9Y3C6 166 aa11.83□□□□□ -0.52
CLN6-223ENST00000637823 STARD13Q9Y3M8 1113 aa11.83□□□□□ -0.52
CLN6-223ENST00000637823 A0A0J9YYE9 177 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 TRBC1P01850 177 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 INHBAP08476 426 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 PIRTP0C851 137 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 ERVK-10P10266 1014 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 GLULP15104 373 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 LPOP22079 712 aaPredicted RBP11.82□□□□□ -0.52
CLN6-223ENST00000637823 PSMA3P25788 255 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 SLC8A1P32418 973 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 ABL2P42684 1182 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 ARCN1P48444 511 aaKnown RBP11.82□□□□□ -0.52
CLN6-223ENST00000637823 SERPINB9P50453 376 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 POLR2LP62875 67 aaKnown RBP11.82□□□□□ -0.52
CLN6-223ENST00000637823 ACVR1Q04771 509 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 ARSIQ5FYB1 569 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 TEDDM1Q5T9Z0 273 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 KCTD16Q68DU8 428 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 NAIF1Q69YI7 327 aaPredicted RBP11.82□□□□□ -0.52
CLN6-223ENST00000637823 PTCRAQ6ISU1 281 aaPredicted RBP11.82□□□□□ -0.52
CLN6-223ENST00000637823 KCNMB4Q86W47 210 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 RASSF3Q86WH2 238 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 RALGPS2Q86X27 583 aaPredicted RBP11.82□□□□□ -0.52
CLN6-223ENST00000637823 UNC5BQ8IZJ1 945 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 MRRFQ96E11 262 aaKnown RBP11.82□□□□□ -0.52
CLN6-223ENST00000637823 C19orf43Q9BQ61 176 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 TMEM245Q9H330 911 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 NLE1Q9NVX2 485 aaPredicted RBP11.82□□□□□ -0.52
CLN6-223ENST00000637823 NSMCE4AQ9NXX6 385 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 ZFATQ9P243 1243 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 SLC2A6Q9UGQ3 507 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 IL36AQ9UHA7 158 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 TBK1Q9UHD2 729 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 NOVA2Q9UNW9 492 aaKnown RBP11.82□□□□□ -0.52
CLN6-223ENST00000637823 SPO11Q9Y5K1 396 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 WASF2Q9Y6W5 498 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 CKAP5Q14008 2032 aa11.82□□□□□ -0.52
CLN6-223ENST00000637823 SCN8AQ9UQD0 1980 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 IQANK1A0A1B0GTG1 560 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 CCDC78A2IDD5 438 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 SPECC1L-ADORA2AF8WAN1 911 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 SLC7A4O43246 635 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 SIN3BO75182 1162 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 PIAS1O75925 651 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 VAPBO95292 243 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 PRKCGP05129 697 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 UGT2B4P06133 528 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 CNTFP26441 200 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 CTHP32929 405 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 SOX9P48436 509 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 MAGOHP61326 146 aaKnown RBP11.81□□□□□ -0.52
CLN6-223ENST00000637823 PFKPQ01813 784 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 THOC5Q13769 683 aaKnown RBP11.81□□□□□ -0.52
CLN6-223ENST00000637823 TMED2Q15363 201 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 HSP90AA5PQ58FG0 334 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 HABP4Q5JVS0 413 aaKnown RBP11.81□□□□□ -0.52
CLN6-223ENST00000637823 C9orf64Q5T6V5 341 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 GRTP1Q5TC63 336 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 BRAT1Q6PJG6 821 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 SERPINA13PQ6UXR4 307 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 TAOK1Q7L7X3 1001 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 GLT6D1Q7Z4J2 308 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 SFTPA1Q8IWL2 248 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 CYP4X1Q8N118 509 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 TTC30BQ8N4P2 665 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 TMIEQ8NEW7 156 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 MDGA1Q8NFP4 955 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 OR13J1Q8NGT2 312 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 KCNV2Q8TDN2 545 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 OR8D1Q8WZ84 308 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 KLHL32Q96NJ5 620 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 CPNE1Q99829 537 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 FBRSL1Q9HCM7 1045 aaKnown RBP11.81□□□□□ -0.52
CLN6-223ENST00000637823 IARS2Q9NSE4 1012 aaKnown RBP11.81□□□□□ -0.52
CLN6-223ENST00000637823 DKK3Q9UBP4 350 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 CTNNAL1Q9UBT7 734 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 KCTD3Q9Y597 815 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 ARL5AQ9Y689 179 aa11.81□□□□□ -0.52
CLN6-223ENST00000637823 ZNF106Q9H2Y7 1883 aaKnown RBP11.8□□□□□ -0.52
CLN6-223ENST00000637823 TSPAN11A1L157 253 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 K7EQS6 105 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 STX7O15400 261 aaKnown RBP11.8□□□□□ -0.52
CLN6-223ENST00000637823 UGT1A9O60656 530 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 LEFTY1O75610 366 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 RPP40O75818 363 aaKnown RBP11.8□□□□□ -0.52
CLN6-223ENST00000637823 KRT37O76014 449 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 KRT38O76015 456 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 PRNPP04156 253 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms