RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 FGF11Q92914 225 aa18.03■□□□□ 0.48
PNKP-225ENST00000636214 WDR92Q96MX6 357 aa18.03■□□□□ 0.48
PNKP-225ENST00000636214 PSKH2Q96QS6 385 aa18.03■□□□□ 0.48
PNKP-225ENST00000636214 APOOQ9BUR5 198 aa18.03■□□□□ 0.48
PNKP-225ENST00000636214 CAPN11Q9UMQ6 739 aa18.03■□□□□ 0.48
PNKP-225ENST00000636214 SHROOM3Q8TF72 1996 aa18.02■□□□□ 0.48
PNKP-225ENST00000636214 LY6G6EA0A0G2JKS1 128 aa18.02■□□□□ 0.48
PNKP-225ENST00000636214 EME2A4GXA9 379 aaPredicted RBP18.02■□□□□ 0.48
PNKP-225ENST00000636214 GCATO75600 419 aa18.02■□□□□ 0.48
PNKP-225ENST00000636214 RARAP10276 462 aa18.02■□□□□ 0.48
PNKP-225ENST00000636214 KELP23276 732 aa18.02■□□□□ 0.48
PNKP-225ENST00000636214 IL1R2P27930 398 aa18.02■□□□□ 0.48
PNKP-225ENST00000636214 CDH6P55285 790 aa18.02■□□□□ 0.48
PNKP-225ENST00000636214 SRP54P61011 504 aaKnown RBP18.02■□□□□ 0.48
PNKP-225ENST00000636214 AGERQ15109 404 aa18.02■□□□□ 0.48
PNKP-225ENST00000636214 CCDC122Q5T0U0 273 aa18.02■□□□□ 0.48
PNKP-225ENST00000636214 CDCP2Q5VXM1 449 aa18.02■□□□□ 0.48
PNKP-225ENST00000636214 DPPA4Q7L190 304 aa18.02■□□□□ 0.48
PNKP-225ENST00000636214 ZSWIM9Q86XI8 627 aa18.02■□□□□ 0.48
PNKP-225ENST00000636214 NIPA2Q8N8Q9 360 aa18.02■□□□□ 0.48
PNKP-225ENST00000636214 WDR48Q8TAF3 677 aa18.02■□□□□ 0.48
PNKP-225ENST00000636214 CSPG4P5Q96PW8 444 aa18.02■□□□□ 0.48
PNKP-225ENST00000636214 BOCQ9BWV1 1114 aa18.02■□□□□ 0.48
PNKP-225ENST00000636214 OR1A2Q9Y585 309 aa18.02■□□□□ 0.48
PNKP-225ENST00000636214 PCDHB1Q9Y5F3 818 aa18.02■□□□□ 0.48
PNKP-225ENST00000636214 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.02■□□□□ 0.482e-9■■□□□ 13.4
PNKP-225ENST00000636214 U3KQA8 63 aa18.02■□□□□ 0.48
PNKP-225ENST00000636214 EIF4E1BA6NMX2 242 aaKnown RBP18.01■□□□□ 0.47
PNKP-225ENST00000636214 USP12O75317 370 aa18.01■□□□□ 0.47
PNKP-225ENST00000636214 RECQL5O94762 991 aaPredicted RBP18.01■□□□□ 0.47
PNKP-225ENST00000636214 TNFP01375 233 aa18.01■□□□□ 0.47
PNKP-225ENST00000636214 CYP2A6P11509 494 aaPredicted RBP18.01■□□□□ 0.47
PNKP-225ENST00000636214 KRT10P13645 584 aa18.01■□□□□ 0.47
PNKP-225ENST00000636214 GJC1P36383 396 aa18.01■□□□□ 0.47
PNKP-225ENST00000636214 PBX1P40424 430 aa18.01■□□□□ 0.47
PNKP-225ENST00000636214 EIF2S3P41091 472 aaKnown RBP18.01■□□□□ 0.47
PNKP-225ENST00000636214 GABREP78334 506 aa18.01■□□□□ 0.47
PNKP-225ENST00000636214 SLC10A7Q0GE19 358 aa18.01■□□□□ 0.47
PNKP-225ENST00000636214 ACOX1Q15067 660 aa18.01■□□□□ 0.47
PNKP-225ENST00000636214 TCEA2Q15560 299 aa18.01■□□□□ 0.47
PNKP-225ENST00000636214 TBC1D25Q3MII6 688 aa18.01■□□□□ 0.47
PNKP-225ENST00000636214 ALKBH5Q6P6C2 394 aaKnown RBP18.01■□□□□ 0.47
PNKP-225ENST00000636214 RBM44Q6ZP01 1051 aaKnown RBP18.01■□□□□ 0.47
PNKP-225ENST00000636214 SDR16C5Q8N3Y7 309 aa18.01■□□□□ 0.47
PNKP-225ENST00000636214 SNIP1Q8TAD8 396 aaKnown RBP18.01■□□□□ 0.47
PNKP-225ENST00000636214 TSACCQ96A04 125 aaPredicted RBP18.01■□□□□ 0.47
PNKP-225ENST00000636214 GRAMD1AQ96CP6 724 aa18.01■□□□□ 0.47
PNKP-225ENST00000636214 ECHDC3Q96DC8 303 aa18.01■□□□□ 0.47
PNKP-225ENST00000636214 PCDH18Q9HCL0 1135 aa18.01■□□□□ 0.47
PNKP-225ENST00000636214 HAUS2Q9NVX0 235 aa18.01■□□□□ 0.47
PNKP-225ENST00000636214 IFNKQ9P0W0 207 aa18.01■□□□□ 0.47
PNKP-225ENST00000636214 GULP1Q9UBP9 304 aa18.01■□□□□ 0.47
PNKP-225ENST00000636214 PADI4Q9UM07 663 aa18.01■□□□□ 0.47
PNKP-225ENST00000636214 PDE2AO00408 941 aaPredicted RBP18■□□□□ 0.47
PNKP-225ENST00000636214 YY2O15391 372 aa18■□□□□ 0.47
PNKP-225ENST00000636214 TLX3O43711 291 aaPredicted RBP18■□□□□ 0.47
PNKP-225ENST00000636214 SOCS5O75159 536 aa18■□□□□ 0.47
PNKP-225ENST00000636214 TCEA3O75764 348 aa18■□□□□ 0.47
PNKP-225ENST00000636214 CPP00450 1065 aa18■□□□□ 0.47
PNKP-225ENST00000636214 MMP13P45452 471 aa18■□□□□ 0.47
PNKP-225ENST00000636214 KIAA1024LP59773 190 aa18■□□□□ 0.47
PNKP-225ENST00000636214 ALG11Q2TAA5 492 aa18■□□□□ 0.47
PNKP-225ENST00000636214 ZFYVE27Q5T4F4 411 aa18■□□□□ 0.47
PNKP-225ENST00000636214 MARC1Q5VT66 337 aa18■□□□□ 0.47
PNKP-225ENST00000636214 LVRNQ6Q4G3 990 aa18■□□□□ 0.47
PNKP-225ENST00000636214 CRTC1Q6UUV9 634 aa18■□□□□ 0.47
PNKP-225ENST00000636214 LIPIQ6XZB0 460 aa18■□□□□ 0.47
PNKP-225ENST00000636214 SLC35F3Q8IY50 421 aa18■□□□□ 0.47
PNKP-225ENST00000636214 ARL10Q8N8L6 244 aa18■□□□□ 0.47
PNKP-225ENST00000636214 PCDH19Q8TAB3 1148 aa18■□□□□ 0.47
PNKP-225ENST00000636214 ZNF564Q8TBZ8 553 aaPredicted RBP18■□□□□ 0.47
PNKP-225ENST00000636214 BTBD6Q96KE9 485 aa18■□□□□ 0.47
PNKP-225ENST00000636214 ZNF578Q96N58 590 aaPredicted RBP18■□□□□ 0.47
PNKP-225ENST00000636214 NUDCD1Q96RS6 583 aa18■□□□□ 0.47
PNKP-225ENST00000636214 LGMNQ99538 433 aa18■□□□□ 0.47
PNKP-225ENST00000636214 DEF6Q9H4E7 631 aa18■□□□□ 0.47
PNKP-225ENST00000636214 WDR26Q9H7D7 661 aa18■□□□□ 0.47
PNKP-225ENST00000636214 KCTD5Q9NXV2 234 aa18■□□□□ 0.47
PNKP-225ENST00000636214 SIRPGQ9P1W8 387 aa18■□□□□ 0.47
PNKP-225ENST00000636214 CTTNBP2NLQ9P2B4 639 aa18■□□□□ 0.47
PNKP-225ENST00000636214 RCOR3Q9P2K3 495 aaPredicted RBP18■□□□□ 0.47
PNKP-225ENST00000636214 B4GALT6Q9UBX8 382 aa18■□□□□ 0.47
PNKP-225ENST00000636214 MOSPD1Q9UJG1 213 aa18■□□□□ 0.47
PNKP-225ENST00000636214 GPR34Q9UPC5 381 aa18■□□□□ 0.47
PNKP-225ENST00000636214 PTPRQQ9UMZ3 2332 aa18■□□□□ 0.47
PNKP-225ENST00000636214 A0A087X0T9 212 aa17.99■□□□□ 0.47
PNKP-225ENST00000636214 A8MX80 341 aa17.99■□□□□ 0.47
PNKP-225ENST00000636214 MPOP05164 745 aa17.99■□□□□ 0.47
PNKP-225ENST00000636214 CYP1A2P05177 515 aa17.99■□□□□ 0.47
PNKP-225ENST00000636214 TPM1P09493 284 aa17.99■□□□□ 0.47
PNKP-225ENST00000636214 FAM228BP0C875 321 aa17.99■□□□□ 0.47
PNKP-225ENST00000636214 TCF4P15884 667 aa17.99■□□□□ 0.47
PNKP-225ENST00000636214 TGM2P21980 687 aa17.99■□□□□ 0.47
PNKP-225ENST00000636214 PCBP4P57723 403 aaKnown RBP17.99■□□□□ 0.47
PNKP-225ENST00000636214 RALGDSQ12967 914 aa17.99■□□□□ 0.47
PNKP-225ENST00000636214 SPIDRQ14159 915 aa17.99■□□□□ 0.47
PNKP-225ENST00000636214 TSR1Q2NL82 804 aaKnown RBP17.99■□□□□ 0.47
PNKP-225ENST00000636214 RALGPS1Q5JS13 557 aa17.99■□□□□ 0.47
PNKP-225ENST00000636214 DENND2CQ68D51 928 aa17.99■□□□□ 0.47
PNKP-225ENST00000636214 LRRC49Q8IUZ0 686 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms