RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 UGT1A5P35504 534 aa16.15■□□□□ 0.18
CLN5-208ENST00000636183 MAPK10P53779 464 aa16.15■□□□□ 0.18
CLN5-208ENST00000636183 PRMT9Q6P2P2 845 aa16.15■□□□□ 0.18
CLN5-208ENST00000636183 ACO2Q99798 780 aaKnown RBP16.15■□□□□ 0.18
CLN5-208ENST00000636183 EFR3BQ9Y2G0 817 aa16.15■□□□□ 0.18
CLN5-208ENST00000636183 ZSCAN5CA6NGD5 496 aaPredicted RBP16.14■□□□□ 0.17
CLN5-208ENST00000636183 A8MUI8 341 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 XKRYO14609 159 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 CYP4F8P98187 520 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 ELP6Q0PNE2 266 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 GALNTL5Q7Z4T8 443 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 SPATA6LQ8N4H0 392 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 PTGR2Q8N8N7 351 aaPredicted RBP16.14■□□□□ 0.17
CLN5-208ENST00000636183 EEF1AKMT1Q8WVE0 214 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 NELL1Q92832 810 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 VPS35Q96QK1 796 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 PTPN18Q99952 460 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 TAPBPLQ9BX59 468 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 TRMT13Q9NUP7 481 aaKnown RBP16.14■□□□□ 0.17
CLN5-208ENST00000636183 CMPK1P30085 196 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 KCNMA1Q12791 1236 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 CERCAMQ5T4B2 595 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 WDR59Q6PJI9 974 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 SLC30A9Q6PML9 568 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 LCN9Q8WX39 176 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 LINGO1Q96FE5 620 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 TEKT5Q96M29 485 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 HIST1H2AAQ96QV6 131 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 CDT1Q9H211 546 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 ARHGEF4Q9NR80 690 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 RIMKLBQ9ULI2 386 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 DIP2AQ14689 1571 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 STX11O75558 287 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 GNPDA1P46926 289 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 RFWD3Q6PCD5 774 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 SLC38A2Q96QD8 506 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 PNO1Q9NRX1 252 aaKnown RBP16.14■□□□□ 0.17
CLN5-208ENST00000636183 SNPHO15079 494 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 CDK14O94921 469 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 LTA4HP09960 611 aaKnown RBP16.14■□□□□ 0.17
CLN5-208ENST00000636183 PDHA2P29803 388 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 PTPN9P43378 593 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 ZNF132P52740 706 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 MSANTD2Q6P1R3 559 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 ZNF280BQ86YH2 543 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 ARL14EPQ8N8R7 260 aaPredicted RBP16.14■□□□□ 0.17
CLN5-208ENST00000636183 SHC3Q92529 594 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 UPF1Q92900 1129 aaKnown RBP eCLIP16.14■□□□□ 0.17
CLN5-208ENST00000636183 TMEM216Q9P0N5 145 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 PTGFRNQ9P2B2 879 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 TRPM1Q7Z4N2 1603 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 IQCF5A8MTL0 148 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 ZNF37AP17032 561 aaPredicted RBP16.14■□□□□ 0.17
CLN5-208ENST00000636183 CYP2C18P33260 490 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 MC1RQ01726 317 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 PPTC7Q8NI37 304 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 TP53INP1Q96A56 240 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 MRPL45Q9BRJ2 306 aaKnown RBP16.14■□□□□ 0.17
CLN5-208ENST00000636183 ATG10Q9H0Y0 220 aa16.14■□□□□ 0.17
CLN5-208ENST00000636183 TPP1O14773 563 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 PRNPP04156 253 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 MBTD1Q05BQ5 628 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 OASLQ15646 514 aaKnown RBP16.13■□□□□ 0.17
CLN5-208ENST00000636183 UBASH3BQ8TF42 649 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 ATG13O75143 517 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 WARSP23381 471 aaKnown RBP16.13■□□□□ 0.17
CLN5-208ENST00000636183 AVPR1BP47901 424 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 SLC13A2Q13183 592 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 LRP8Q14114 963 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 MYBPC2Q14324 1141 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 KYQ8NBH2 561 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 KIAA1143Q96AT1 154 aaPredicted RBP16.13■□□□□ 0.17
CLN5-208ENST00000636183 ETNK2Q9NVF9 386 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 CMTM6Q9NX76 183 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 NR2E1Q9Y466 385 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 FAM92AA1XBS5 289 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 FSHRP23945 695 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 CCKBRP32239 447 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 NR1D2Q14995 579 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 FAM110CQ1W6H9 321 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 HECTD2Q5U5R9 776 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 TAPT1Q6NXT6 567 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 NPAS4Q8IUM7 802 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 REXO1L1PQ8IX06 675 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 AIF1LQ9BQI0 150 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 IL22Q9GZX6 179 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 MAFO75444 373 aaPredicted RBP16.13■□□□□ 0.17
CLN5-208ENST00000636183 LGR5O75473 907 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 CBX5P45973 191 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 ARHGDIBP52566 201 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 PPCDCQ96CD2 204 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 ZNF541Q9H0D2 1346 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 OR10H3O60404 316 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 C8AP07357 584 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 TUSC3Q13454 348 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 GRM3Q14832 879 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 ZNF611Q8N823 705 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 TMEM138Q9NPI0 162 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 RASSF1Q9NS23 344 aa16.13■□□□□ 0.17
CLN5-208ENST00000636183 PHF24Q9UPV7 400 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms