RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 TMEM131Q92545 1883 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 TNRC6BQ9UPQ9 1833 aaKnown RBP8.56□□□□□ -1.04
CDKL5-209ENST00000635828 RIOK3O14730 519 aaKnown RBP8.56□□□□□ -1.04
CDKL5-209ENST00000635828 RNASEH1O60930 286 aaKnown RBP8.56□□□□□ -1.04
CDKL5-209ENST00000635828 FSBPO95073 299 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 RPL21P46778 160 aaKnown RBP8.56□□□□□ -1.04
CDKL5-209ENST00000635828 TMPRSS15P98073 1019 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 ZNF33AQ06730 810 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 CDK18Q07002 472 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 POU6F1Q14863 301 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 LRRC66Q68CR7 880 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 TCEAL6Q6IPX3 200 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 CRTC1Q6UUV9 634 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 BLOC1S5Q8TDH9 187 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 CASKIN2Q8WXE0 1202 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 SCAMP4Q969E2 229 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 TCEAL3Q969E4 200 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 HSPA12BQ96MM6 686 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 WDR83Q9BRX9 315 aaKnown RBP8.56□□□□□ -1.04
CDKL5-209ENST00000635828 FAM153AQ9UHL3 310 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 PNMA8BQ9ULN7 279 aaPredicted RBP8.56□□□□□ -1.04
CDKL5-209ENST00000635828 LOC285095A0A1B0GVY8 99 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 AREL1O15033 823 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 NPC1O15118 1278 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 PLRG1O43660 514 aaKnown RBP8.56□□□□□ -1.04
CDKL5-209ENST00000635828 RPP40O75818 363 aaKnown RBP8.56□□□□□ -1.04
CDKL5-209ENST00000635828 ECEL1O95672 775 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 STIP1P31948 543 aaKnown RBP8.56□□□□□ -1.04
CDKL5-209ENST00000635828 LIG3P49916 1009 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 PPP1R7Q15435 360 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 TPRG1LQ5T0D9 272 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 RANBP10Q6VN20 620 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 GSPT2Q8IYD1 628 aaKnown RBP8.56□□□□□ -1.04
CDKL5-209ENST00000635828 CAMKK1Q8N5S9 505 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 PTCD2Q8WV60 388 aaKnown RBP8.56□□□□□ -1.04
CDKL5-209ENST00000635828 ORAI3Q9BRQ5 295 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 DUSP15Q9H1R2 295 aaPredicted RBP8.56□□□□□ -1.04
CDKL5-209ENST00000635828 SLC2A6Q9UGQ3 507 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 PCYOX1Q9UHG3 505 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 EIF2B4Q9UI10 523 aaKnown RBP8.56□□□□□ -1.04
CDKL5-209ENST00000635828 FARP1Q9Y4F1 1045 aaPredicted RBP8.56□□□□□ -1.04
CDKL5-209ENST00000635828 PLXND1Q9Y4D7 1925 aa8.56□□□□□ -1.04
CDKL5-209ENST00000635828 A0A1W2PQU0 124 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 OPHN1O60890 802 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 CPP00450 1065 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 CD6P30203 668 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 NEK3P51956 506 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 AP1S1P61966 158 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 CNGA3Q16281 694 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 HSF5Q4G112 596 aaPredicted RBP8.55□□□□□ -1.04
CDKL5-209ENST00000635828 FNBP1LQ5T0N5 605 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 ARMC12Q5T9G4 340 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 DCLK2Q8N568 766 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 ZBTB44Q8NCP5 570 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 NELL1Q92832 810 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 FSD1LQ9BXM9 530 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 BTBD1Q9H0C5 482 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 SUDS3Q9H7L9 328 aaPredicted RBP8.55□□□□□ -1.04
CDKL5-209ENST00000635828 RXFP3Q9NSD7 469 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 ASIC3Q9UHC3 531 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 A0A0J9YYE9 177 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 POM121BA6NF01 834 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 C1QTNF3-AMACRE9PGA6 284 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 NEMP1O14524 444 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 SEMA4FO95754 770 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 ADH1BP00325 375 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 TRBC1P01850 177 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 RHOXF2BP0C7M4 288 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 MMP12P39900 470 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 CSNK1DP48730 415 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 SESN2P58004 480 aaPredicted RBP8.55□□□□□ -1.04
CDKL5-209ENST00000635828 FASTKD3Q14CZ7 662 aaKnown RBP8.55□□□□□ -1.04
CDKL5-209ENST00000635828 PARP6Q2NL67 630 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 ZNF648Q5T619 568 aaPredicted RBP8.55□□□□□ -1.04
CDKL5-209ENST00000635828 CFAP58Q5T655 872 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 MAMSTRQ6ZN01 415 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 Q6ZVL8 140 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 CAND1Q86VP6 1230 aaKnown RBP8.55□□□□□ -1.04
CDKL5-209ENST00000635828 PLPP6Q8IY26 295 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 UNC5BQ8IZJ1 945 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 OR13C4Q8NGS5 318 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 OR2I1PQ8NGU4 316 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 RHOXF2Q9BQY4 288 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 MIR1-1HGQ9H1L0 117 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 TRHDEQ9UKU6 1024 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 TP53BP1Q12888 1972 aaPredicted RBP8.55□□□□□ -1.04
CDKL5-209ENST00000635828 GOLGA6L10A0A0M3HER8 536 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 OR51F1A6NGY5 319 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 UPK3BL1B0FP48 263 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 GOLGA8KD6RF30 607 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 UPK3BL2E5RIL1 263 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 GOLGA8TH3BQL2 631 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 ALDH1A2O94788 518 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 PAPSS2O95340 614 aaPredicted RBP8.55□□□□□ -1.04
CDKL5-209ENST00000635828 C1SP09871 688 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 ADCY8P40145 1251 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 CDKN1CP49918 316 aaPredicted RBP8.55□□□□□ -1.04
CDKL5-209ENST00000635828 EPHB1P54762 984 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 KCNJ11Q14654 390 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 LONP2Q86WA8 852 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms