RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 TLCD1Q96CP7 247 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 RMDN1Q96DB5 314 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 PPP1R16AQ96I34 528 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 FEM1CQ96JP0 617 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 CD248Q9HCU0 757 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 EIF2B3Q9NR50 452 aaKnown RBP14.54□□□□□ -0.08
LINC00339-208ENST00000634934 MID1O15344 667 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 HTRA2O43464 458 aaPredicted RBP14.53□□□□□ -0.08
LINC00339-208ENST00000634934 TMEM63AO94886 807 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 PGLSO95336 258 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 ADH1BP00325 375 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 ITIH2P19823 946 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 TPSB2P20231 275 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 SLC8A1P32418 973 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 ADRA1AP35348 466 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 CHRNA4P43681 627 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 TPSAB1Q15661 275 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 CEP85LQ5SZL2 805 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 NAPEPLDQ6IQ20 393 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 KIAA1324Q6UXG2 1013 aaKnown RBP14.53□□□□□ -0.08
LINC00339-208ENST00000634934 HOOK3Q86VS8 718 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 KLHDC8BQ8IXV7 354 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 NAT8LQ8N9F0 302 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 GANCQ8TET4 914 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 PRCCQ92733 491 aaPredicted RBP14.53□□□□□ -0.08
LINC00339-208ENST00000634934 ARRDC3Q96B67 414 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 SIPA1Q96FS4 1042 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 PGM2Q96G03 612 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 HHIPQ96QV1 700 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 ADGRE3Q9BY15 652 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 ZDHHC18Q9NUE0 388 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 PIH1D1Q9NWS0 290 aaKnown RBP14.53□□□□□ -0.08
LINC00339-208ENST00000634934 WHRNQ9P202 907 aa14.53□□□□□ -0.08
LINC00339-208ENST00000634934 BCCIPQ9P287 314 aaKnown RBP eCLIP14.53□□□□□ -0.08
LINC00339-208ENST00000634934 ARIH1Q9Y4X5 557 aaPredicted RBP14.53□□□□□ -0.08
LINC00339-208ENST00000634934 LOC285095A0A1B0GVY8 99 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 C16orf96A6NNT2 1141 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 PLK4O00444 970 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 NDC80O14777 642 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 ALDH1A2O94788 518 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 SUN1O94901 812 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 NDST3O95803 873 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 PRLP01236 227 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 DNTTP04053 509 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 GABRG2P18507 467 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 NDUFV2P19404 249 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 C5AR1P21730 350 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 XPAP23025 273 aaPredicted RBP14.52□□□□□ -0.08
LINC00339-208ENST00000634934 ITGB7P26010 798 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 GRIA1P42261 906 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 MAGEA6P43360 314 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 CXCL12P48061 93 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 PLTPP55058 493 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 SARNPP82979 210 aaKnown RBP14.52□□□□□ -0.08
LINC00339-208ENST00000634934 CDK16Q00536 496 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 MORF4L2Q15014 288 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 SIRPB2Q5JXA9 342 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 ANO7Q6IWH7 933 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 HIBCHQ6NVY1 386 aaPredicted RBP14.52□□□□□ -0.08
LINC00339-208ENST00000634934 FBXL19Q6PCT2 694 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 BRAT1Q6PJG6 821 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 C6orf89Q6UWU4 347 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 RANBP10Q6VN20 620 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 LINC00523Q86TU6 105 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 ZSWIM9Q86XI8 627 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 DNAAF3Q8N9W5 541 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 DTWD2Q8NBA8 298 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 OR52K1Q8NGK4 314 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 ECHDC3Q96DC8 303 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 MRGPRX1Q96LB2 322 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 TRIB3Q96RU7 358 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 IER2Q9BTL4 223 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 SPATA6Q9NWH7 488 aaPredicted RBP14.52□□□□□ -0.08
LINC00339-208ENST00000634934 GRHL1Q9NZI5 618 aa14.52□□□□□ -0.08
LINC00339-208ENST00000634934 CKAP5Q14008 2032 aa14.52□□□□□ -0.09
LINC00339-208ENST00000634934 A0A1W2PQ67 120 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 FZD6O60353 706 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 EPOP01588 193 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 PRKCGP05129 697 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 ATXN1LP0C7T5 689 aaKnown RBP14.51□□□□□ -0.09
LINC00339-208ENST00000634934 ACADMP11310 421 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 CTPS1P17812 591 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 HLA-DPA1P20036 260 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 RPL26P61254 145 aaKnown RBP14.51□□□□□ -0.09
LINC00339-208ENST00000634934 POLR2LP62875 67 aaKnown RBP14.51□□□□□ -0.09
LINC00339-208ENST00000634934 PPP2R2AP63151 447 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 MTM1Q13496 603 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 SLC1A5Q15758 541 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 LRRC73Q5JTD7 316 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 PARS2Q7L3T8 475 aaKnown RBP14.51□□□□□ -0.09
LINC00339-208ENST00000634934 TTC7BQ86TV6 843 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 HDDC3Q8N4P3 179 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 PIH1D2Q8WWB5 315 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 FMO2Q99518 471 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 OMDQ99983 421 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 PABPC3Q9H361 631 aaKnown RBP14.51□□□□□ -0.09
LINC00339-208ENST00000634934 DKK3Q9UBP4 350 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 PHTF1Q9UMS5 762 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 RPL26L1Q9UNX3 145 aaKnown RBP14.51□□□□□ -0.09
LINC00339-208ENST00000634934 SHOC2Q9UQ13 582 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms