RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 HPCAL4Q9UM19 191 aa15.72■□□□□ 0.11
SNRNP48-203ENST00000634363 RP1P56715 2156 aa15.72■□□□□ 0.11
SNRNP48-203ENST00000634363 A0A1W2PNU3 283 aaPredicted RBP15.71■□□□□ 0.11
SNRNP48-203ENST00000634363 PMS2P1A4D2B8 440 aa15.71■□□□□ 0.11
SNRNP48-203ENST00000634363 WASH4PA8MWX3 477 aa15.71■□□□□ 0.11
SNRNP48-203ENST00000634363 CASC3O15234 703 aaKnown RBP15.71■□□□□ 0.11
SNRNP48-203ENST00000634363 MMP20O60882 483 aa15.71■□□□□ 0.11
SNRNP48-203ENST00000634363 GCATO75600 419 aa15.71■□□□□ 0.11
SNRNP48-203ENST00000634363 UGT2B4P06133 528 aa15.71■□□□□ 0.11
SNRNP48-203ENST00000634363 KRT7P08729 469 aa15.71■□□□□ 0.11
SNRNP48-203ENST00000634363 RPIAP49247 311 aa15.71■□□□□ 0.11
SNRNP48-203ENST00000634363 SNRPD1P62314 119 aaKnown RBP15.71■□□□□ 0.11
SNRNP48-203ENST00000634363 PTK2BQ14289 1009 aa15.71■□□□□ 0.11
SNRNP48-203ENST00000634363 TCEAL1Q15170 157 aa15.71■□□□□ 0.11
SNRNP48-203ENST00000634363 TCEA2Q15560 299 aa15.71■□□□□ 0.11
SNRNP48-203ENST00000634363 KIAA1328Q86T90 577 aa15.71■□□□□ 0.11
SNRNP48-203ENST00000634363 TXLNBQ8N3L3 684 aa15.71■□□□□ 0.11
SNRNP48-203ENST00000634363 TPCN2Q8NHX9 752 aa15.71■□□□□ 0.11
SNRNP48-203ENST00000634363 RAB7BQ96AH8 199 aa15.71■□□□□ 0.11
SNRNP48-203ENST00000634363 KLHL32Q96NJ5 620 aa15.71■□□□□ 0.11
SNRNP48-203ENST00000634363 SLC13A1Q9BZW2 595 aa15.71■□□□□ 0.11
SNRNP48-203ENST00000634363 SEMA4CQ9C0C4 833 aa15.71■□□□□ 0.11
SNRNP48-203ENST00000634363 A0A0A6YYK5 440 aaPredicted RBP15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 TPP1O14773 563 aa15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 TNFSF15O95150 251 aa15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 POP4O95707 220 aaKnown RBP15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 ANXA6P08133 673 aa15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 CDH6P55285 790 aa15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 PFN3P60673 137 aa15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 MYLK3Q32MK0 819 aa15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 PARP15Q460N3 678 aa15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 ATXN7L2Q5T6C5 722 aaPredicted RBP15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 KIAA1614Q5VZ46 1190 aa15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 TXNRD3NBQ6F5E7 133 aa15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 ZSCAN30Q86W11 494 aa15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 TMEM139Q8IV31 216 aa15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 PHACTR4Q8IZ21 702 aa15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 ACRBPQ8NEB7 543 aa15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 CCDC112Q8NEF3 446 aa15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 OR2AP1Q8NGE2 309 aa15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 ANP32BQ92688 251 aaKnown RBP15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 ARHGEF2Q92974 986 aaKnown RBP15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 COL26A1Q96A83 441 aa15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 ISG20Q96AZ6 181 aaKnown RBP15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 CENPTQ96BT3 561 aa15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 CCDC97Q96F63 343 aaPredicted RBP15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 CWC15Q9P013 229 aaKnown RBP15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 GULP1Q9UBP9 304 aa15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 DOLKQ9UPQ8 538 aa15.7■□□□□ 0.1
SNRNP48-203ENST00000634363 COL27A1Q8IZC6 1860 aaPredicted RBP15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 HELZ2Q9BYK8 2649 aaKnown RBP15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 PYCARD-AS1I3L0S3 204 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 YY2O15391 372 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 SPOPO43791 374 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 NRDCO43847 1150 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 TM7SF2O76062 418 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 KRT10P13645 584 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 ITIH2P19823 946 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 SLC1A1P43005 524 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 HCAR3P49019 387 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 VAV2P52735 878 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 HADHBP55084 474 aaKnown RBP15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 GEMIN4P57678 1058 aaKnown RBP15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 YBEYP58557 167 aaPredicted RBP15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 SPIDRQ14159 915 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 ESRP1Q6NXG1 681 aaKnown RBP15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 GDPD4Q6W3E5 623 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 CCDC81Q6ZN84 652 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 CPNE8Q86YQ8 564 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 PLPP6Q8IY26 295 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 SLC35F3Q8IY50 421 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 UMODL1-AS1Q8N2C9 162 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 ARL14Q8N4G2 192 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 NETO2Q8NC67 525 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 GRAMD1AQ96CP6 724 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 WBP1Q96G27 269 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 PRR11Q96HE9 360 aaPredicted RBP15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 CCDC3Q9BQI4 270 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 WRAP53Q9BUR4 548 aaKnown RBP15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 BOCQ9BWV1 1114 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 PCDH18Q9HCL0 1135 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 MBNL1Q9NR56 388 aaKnown RBP15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 PNMA8BQ9ULN7 279 aaPredicted RBP15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 PADI4Q9UM07 663 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 TFR2Q9UP52 801 aa15.69■□□□□ 0.1
SNRNP48-203ENST00000634363 ZSCAN5CA6NGD5 496 aaPredicted RBP15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 RASA4BC9J798 803 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 RASA4O43374 803 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 BUB1O43683 1085 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 TCEA3O75764 348 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 TSHRP16473 764 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 ERCC2P18074 760 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 IGFALSP35858 605 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 NDST2P52849 883 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 NAP1L1P55209 391 aaKnown RBP15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 TAS2R40P59535 323 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 PPARDQ03181 441 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 RAD51Q06609 339 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 DPYSQ14117 519 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms