RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 WHAMMP3Q1A5X7 153 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 P3H1Q32P28 736 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 GSTA5Q7RTV2 222 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 ZSWIM9Q86XI8 627 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 KLHL7Q8IXQ5 586 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 DEFB124Q8NES8 71 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 OXNAD1Q96HP4 312 aaPredicted RBP18.78■□□□□ 0.6
PNKP-224ENST00000631020 SUV39H2Q9H5I1 410 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 ATP13A3Q9H7F0 1226 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 FBXL12Q9NXK8 326 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 UBP1Q9NZI7 540 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 SERGEFQ9UGK8 458 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 RSPH14Q9UHP6 348 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 NEU2Q9Y3R4 380 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 EPG5Q9HCE0 2579 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 CEP295Q9C0D2 2601 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.77■□□□□ 0.6
PNKP-224ENST00000631020 C10orf142B7Z368 130 aa18.77■□□□□ 0.6
PNKP-224ENST00000631020 C1QTNF3-AMACRE9PGA6 284 aa18.77■□□□□ 0.6
PNKP-224ENST00000631020 CCDC188H7C350 402 aa18.77■□□□□ 0.6
PNKP-224ENST00000631020 CD59P13987 128 aa18.77■□□□□ 0.6
PNKP-224ENST00000631020 CD27P26842 260 aa18.77■□□□□ 0.6
PNKP-224ENST00000631020 PSMB4P28070 264 aa18.77■□□□□ 0.6
PNKP-224ENST00000631020 PTGIRP43119 386 aa18.77■□□□□ 0.6
PNKP-224ENST00000631020 TUBB2AQ13885 445 aa18.77■□□□□ 0.6
PNKP-224ENST00000631020 GRM3Q14832 879 aa18.77■□□□□ 0.6
PNKP-224ENST00000631020 ZNF805Q5CZA5 627 aa18.77■□□□□ 0.6
PNKP-224ENST00000631020 FAM46CQ5VWP2 391 aa18.77■□□□□ 0.6
PNKP-224ENST00000631020 TAB3Q8N5C8 712 aaPredicted RBP18.77■□□□□ 0.6
PNKP-224ENST00000631020 CCDC89Q8N998 374 aa18.77■□□□□ 0.6
PNKP-224ENST00000631020 BIRC7Q96CA5 298 aa18.77■□□□□ 0.6
PNKP-224ENST00000631020 ECHDC3Q96DC8 303 aa18.77■□□□□ 0.6
PNKP-224ENST00000631020 ZNF641Q96N77 438 aaPredicted RBP18.77■□□□□ 0.6
PNKP-224ENST00000631020 CNTNAP3BQ96NU0 1288 aa18.77■□□□□ 0.6
PNKP-224ENST00000631020 TUBB2BQ9BVA1 445 aa18.77■□□□□ 0.6
PNKP-224ENST00000631020 OSBPL1AQ9BXW6 950 aa18.77■□□□□ 0.6
PNKP-224ENST00000631020 CNTNAP3Q9BZ76 1288 aa18.77■□□□□ 0.6
PNKP-224ENST00000631020 PCYOX1Q9UHG3 505 aa18.77■□□□□ 0.6
PNKP-224ENST00000631020 HTRA2O43464 458 aaPredicted RBP18.76■□□□□ 0.59
PNKP-224ENST00000631020 CER1O95813 267 aa18.76■□□□□ 0.59
PNKP-224ENST00000631020 SERPINA4P29622 427 aa18.76■□□□□ 0.59
PNKP-224ENST00000631020 GRIA4P48058 902 aa18.76■□□□□ 0.59
PNKP-224ENST00000631020 C2orf54Q08AI8 447 aa18.76■□□□□ 0.59
PNKP-224ENST00000631020 CNTN1Q12860 1018 aa18.76■□□□□ 0.59
PNKP-224ENST00000631020 PARP6Q2NL67 630 aa18.76■□□□□ 0.59
PNKP-224ENST00000631020 ITPRIPL1Q6GPH6 555 aa18.76■□□□□ 0.59
PNKP-224ENST00000631020 ARHGEF18Q6ZSZ5 1173 aa18.76■□□□□ 0.59
PNKP-224ENST00000631020 MLPHQ9BV36 600 aaPredicted RBP18.76■□□□□ 0.59
PNKP-224ENST00000631020 RAI2Q9Y5P3 530 aa18.76■□□□□ 0.59
PNKP-224ENST00000631020 ANKRD36A6QL64 1941 aa18.76■□□□□ 0.59
PNKP-224ENST00000631020 A0A1W2PP55 124 aa18.75■□□□□ 0.59
PNKP-224ENST00000631020 LRRC72A6NJI9 287 aa18.75■□□□□ 0.59
PNKP-224ENST00000631020 C16orf96A6NNT2 1141 aa18.75■□□□□ 0.59
PNKP-224ENST00000631020 FZD6O60353 706 aa18.75■□□□□ 0.59
PNKP-224ENST00000631020 PRLP01236 227 aa18.75■□□□□ 0.59
PNKP-224ENST00000631020 PDHA1P08559 390 aa18.75■□□□□ 0.59
PNKP-224ENST00000631020 ITGB7P26010 798 aa18.75■□□□□ 0.59
PNKP-224ENST00000631020 TEAD4Q15561 434 aa18.75■□□□□ 0.59
PNKP-224ENST00000631020 TRIP13Q15645 432 aaPredicted RBP18.75■□□□□ 0.59
PNKP-224ENST00000631020 FAXCQ5TGI0 409 aa18.75■□□□□ 0.59
PNKP-224ENST00000631020 KIAA0895LQ68EN5 471 aa18.75■□□□□ 0.59
PNKP-224ENST00000631020 KDELC1Q6UW63 502 aa18.75■□□□□ 0.59
PNKP-224ENST00000631020 PARS2Q7L3T8 475 aaKnown RBP18.75■□□□□ 0.59
PNKP-224ENST00000631020 OR2T34Q8NGX1 318 aa18.75■□□□□ 0.59
PNKP-224ENST00000631020 GANCQ8TET4 914 aa18.75■□□□□ 0.59
PNKP-224ENST00000631020 SLCO2A1Q92959 643 aa18.75■□□□□ 0.59
PNKP-224ENST00000631020 FAM131CQ96AQ9 280 aa18.75■□□□□ 0.59
PNKP-224ENST00000631020 KRT12Q99456 494 aa18.75■□□□□ 0.59
PNKP-224ENST00000631020 OMDQ99983 421 aa18.75■□□□□ 0.59
PNKP-224ENST00000631020 TDRD1Q9BXT4 1180 aaKnown RBP18.75■□□□□ 0.59
PNKP-224ENST00000631020 NEUROG2Q9H2A3 272 aa18.75■□□□□ 0.59
PNKP-224ENST00000631020 DKK3Q9UBP4 350 aa18.75■□□□□ 0.59
PNKP-224ENST00000631020 TSPAN11A1L157 253 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 SOCS5O75159 536 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 PMPCBO75439 489 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 KRT14P02533 472 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 IGHV4-34P06331 123 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 TIMP2P16035 220 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 CKAP4Q07065 602 aaKnown RBP18.74■□□□□ 0.59
PNKP-224ENST00000631020 SLC14A2Q15849 920 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.74■□□□□ 0.59
PNKP-224ENST00000631020 KDELC2Q7Z4H8 507 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 KLHDC8BQ8IXV7 354 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 HCAR2Q8TDS4 363 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 PDCD6IPQ8WUM4 868 aaKnown RBP18.74■□□□□ 0.59
PNKP-224ENST00000631020 SNX19Q92543 992 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 TRIB3Q96RU7 358 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 ORAI3Q9BRQ5 295 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 HDAC8Q9BY41 377 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 KDM4CQ9H3R0 1056 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 ETNK1Q9HBU6 452 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 FAM153AQ9UHL3 310 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 FEZ2Q9UHY8 353 aaPredicted RBP18.74■□□□□ 0.59
PNKP-224ENST00000631020 WASF3Q9UPY6 502 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 CHKBQ9Y259 395 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 PCDHB9Q9Y5E1 797 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 KNL1Q8NG31 2342 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 SLC7A4O43246 635 aa18.74■□□□□ 0.59
PNKP-224ENST00000631020 RNASEH2AO75792 299 aaKnown RBP18.74■□□□□ 0.59
PNKP-224ENST00000631020 PGLSO95336 258 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms