RNA–Protein interactions for RNA: ENST00000630543.2

NRXN1-233, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 4,500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-233	ENST00000630543	TNFRSF10B	O14763	440 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	ATP6AP2	O75787	350 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	CNP	P09543	421 aa	Known RBP	13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	MPST	P25325	297 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	GCA	P28676	217 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	LRRC26	Q2I0M4	334 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	SPDYA	Q5MJ70	313 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	TTC7B	Q86TV6	843 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	POF1B	Q8WVV4	589 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	ARNTL2	Q8WYA1	636 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	C1orf74	Q96LT6	269 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	TRIM54	Q9BYV2	358 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	NMUR2	Q9GZQ4	415 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	WWOX	Q9NZC7	414 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	FKBPL	Q9UIM3	349 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	RFPL1	O75677	317 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	WDR5	P61964	334 aa	Known RBP	13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	SNRPD1	P62314	119 aa	Known RBP	13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	RNF43	Q68DV7	783 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	ARHGAP12	Q8IWW6	846 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	FBXO39	Q8N4B4	442 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	ZNF366	Q8N895	744 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	CMTM5	Q96DZ9	223 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	MYO19	Q96H55	970 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	MID1IP1	Q9NPA3	183 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	SEMA4B	Q9NPR2	832 aa	Predicted RBP	13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	PACSIN3	Q9UKS6	424 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	PTPRF	P10586	1907 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543		A0A0U1RQS6	177 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	GJB3	O75712	270 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	ALPI	P09923	528 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	HIST1H2AD	P20671	130 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	NIPAL4	Q0D2K0	466 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	MPPE1	Q53F39	396 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	RBM20	Q5T481	1227 aa	Known RBP	13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	RNF168	Q8IYW5	571 aa	Predicted RBP	13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	PTGR2	Q8N8N7	351 aa	Predicted RBP	13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	PIP4K2C	Q8TBX8	421 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	HIST1H2AH	Q96KK5	128 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	LRGUK	Q96M69	825 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	HIST1H2AJ	Q99878	128 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	H2AFJ	Q9BTM1	129 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	CCDC162P	A2VCL2	907 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543		I6L893	689 aa	Predicted RBP	13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	CHUK	O15111	745 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	RPP40	O75818	363 aa	Known RBP	13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	PFKP	Q01813	784 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	PRKAA1	Q13131	559 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	GALNTL6	Q49A17	601 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	THEMIS2	Q5TEJ8	643 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	MRGPRX2	Q96LB1	330 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	TSGA13	Q96PP4	275 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	PARP14	Q460N5	1801 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	AFTPH	Q6ULP2	937 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	IFNE	Q86WN2	208 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	PLD6	Q8N2A8	252 aa	Known RBP	13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	UMODL1-AS1	Q8N2C9	162 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	FSTL5	Q8N475	847 aa	Predicted RBP	13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	RNF148	Q8N7C7	305 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	TOP1MT	Q969P6	601 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	SPATA16	Q9BXB7	569 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543	KCNK4	Q9NYG8	393 aa		13.34	□□□□□ -0.27
NRXN1-233	ENST00000630543		A0A087X1B8	175 aa		13.33	□□□□□ -0.27
NRXN1-233	ENST00000630543	TBC1D3B	A6NDS4	549 aa		13.33	□□□□□ -0.27
NRXN1-233	ENST00000630543	CFAP99	D6REC4	459 aa		13.33	□□□□□ -0.27
NRXN1-233	ENST00000630543	LZTS3	O60299	673 aa	Predicted RBP	13.33	□□□□□ -0.27
NRXN1-233	ENST00000630543	ALDOA	P04075	364 aa	Known RBP	13.33	□□□□□ -0.27
NRXN1-233	ENST00000630543	ZNF7	P17097	686 aa	Predicted RBP	13.33	□□□□□ -0.27
NRXN1-233	ENST00000630543	BTK	Q06187	659 aa		13.33	□□□□□ -0.27
NRXN1-233	ENST00000630543	SCIMP	Q6UWF3	145 aa		13.33	□□□□□ -0.27
NRXN1-233	ENST00000630543	KIRREL3	Q8IZU9	778 aa		13.33	□□□□□ -0.27
NRXN1-233	ENST00000630543	SPATA17	Q96L03	361 aa		13.33	□□□□□ -0.27
NRXN1-233	ENST00000630543	SERPINI1	Q99574	410 aa		13.33	□□□□□ -0.27
NRXN1-233	ENST00000630543	WDR83	Q9BRX9	315 aa	Known RBP	13.33	□□□□□ -0.27
NRXN1-233	ENST00000630543	RNF38	Q9H0F5	515 aa		13.33	□□□□□ -0.27
NRXN1-233	ENST00000630543	TGM5	O43548	720 aa		13.33	□□□□□ -0.28
NRXN1-233	ENST00000630543	ITM2A	O43736	263 aa		13.33	□□□□□ -0.28
NRXN1-233	ENST00000630543	LUC7L3	O95232	432 aa	Known RBP	13.33	□□□□□ -0.28
NRXN1-233	ENST00000630543	TIMP1	P01033	207 aa		13.33	□□□□□ -0.28
NRXN1-233	ENST00000630543	CALB2	P22676	271 aa		13.33	□□□□□ -0.28
NRXN1-233	ENST00000630543	GRAMD1B	Q3KR37	738 aa		13.33	□□□□□ -0.28
NRXN1-233	ENST00000630543	FNDC3B	Q53EP0	1204 aa	Known RBP	13.33	□□□□□ -0.28
NRXN1-233	ENST00000630543	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.33	□□□□□ -0.28
NRXN1-233	ENST00000630543	BBS7	Q8IWZ6	715 aa		13.33	□□□□□ -0.28
NRXN1-233	ENST00000630543	MYO1H	Q8N1T3	1032 aa		13.33	□□□□□ -0.28
NRXN1-233	ENST00000630543	EFCAB3	Q8N7B9	438 aa		13.33	□□□□□ -0.28
NRXN1-233	ENST00000630543	CCDC126	Q96EE4	140 aa		13.33	□□□□□ -0.28
NRXN1-233	ENST00000630543	NOP53	Q9NZM5	478 aa	Known RBP	13.33	□□□□□ -0.28
NRXN1-233	ENST00000630543	BIRC5	O15392	142 aa		13.33	□□□□□ -0.28
NRXN1-233	ENST00000630543	PRAMEF11	O60813	436 aa		13.33	□□□□□ -0.28
NRXN1-233	ENST00000630543	PTPN4	P29074	926 aa		13.33	□□□□□ -0.28
NRXN1-233	ENST00000630543	RPL14	P50914	215 aa	Known RBP	13.33	□□□□□ -0.28
NRXN1-233	ENST00000630543	TEAD2	Q15562	447 aa		13.33	□□□□□ -0.28
NRXN1-233	ENST00000630543	GET4	Q7L5D6	327 aa	Predicted RBP	13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms