RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 PLEKHG4Q58EX7 1191 aa17.77■□□□□ 0.43
FARP1-242ENST00000627049 FAM182AQ5T1J6 154 aa17.77■□□□□ 0.43
FARP1-242ENST00000627049 RNF219Q5W0B1 726 aaPredicted RBP17.77■□□□□ 0.43
FARP1-242ENST00000627049 RNF19BQ6ZMZ0 732 aa17.77■□□□□ 0.43
FARP1-242ENST00000627049 MRPL45Q9BRJ2 306 aaKnown RBP17.77■□□□□ 0.43
FARP1-242ENST00000627049 RNF19AQ9NV58 838 aa17.77■□□□□ 0.43
FARP1-242ENST00000627049 H2AFY2Q9P0M6 372 aaPredicted RBP17.77■□□□□ 0.43
FARP1-242ENST00000627049 ASB3Q9Y575 518 aa17.77■□□□□ 0.43
FARP1-242ENST00000627049 FGF10O15520 208 aaPredicted RBP17.76■□□□□ 0.43
FARP1-242ENST00000627049 RECQL4O94761 1208 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 ENTPD1P49961 510 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 EFEMP1Q12805 493 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 CA9Q16790 459 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 ZNF829Q3KNS6 432 aaPredicted RBP17.76■□□□□ 0.43
FARP1-242ENST00000627049 CLEC6AQ6EIG7 209 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 PAOXQ6QHF9 649 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 CDYL2Q8N8U2 506 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 CANT1Q8WVQ1 401 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 TSEN34Q9BSV6 310 aaKnown RBP17.76■□□□□ 0.43
FARP1-242ENST00000627049 TNPO3Q9Y5L0 923 aaKnown RBP17.76■□□□□ 0.43
FARP1-242ENST00000627049 SLIT2O94813 1529 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 F5H5T6 163 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 TOP3BO95985 862 aaKnown RBP17.76■□□□□ 0.43
FARP1-242ENST00000627049 GJB1P08034 283 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 ZNF286BP0CG31 522 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 ADRA1BP35368 520 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 TP53BP2Q13625 1128 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 HERPUD2Q9BSE4 406 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 KATNAL1Q9BW62 490 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 ALG2Q9H553 416 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 IGSF9Q9P2J2 1179 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 PNMA8BQ9ULN7 279 aaPredicted RBP17.76■□□□□ 0.43
FARP1-242ENST00000627049 IFNA14P01570 189 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 ZNF37AP17032 561 aaPredicted RBP17.76■□□□□ 0.43
FARP1-242ENST00000627049 IDH2P48735 452 aaKnown RBP17.76■□□□□ 0.43
FARP1-242ENST00000627049 RHDQ02161 417 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 CCNIQ14094 377 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 TRIQKQ629K1 86 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 PACRGLQ8N7B6 248 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 B3GALNT2Q8NCR0 500 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 PHF21AQ96BD5 680 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 C12orf43Q96C57 262 aaKnown RBP17.76■□□□□ 0.43
FARP1-242ENST00000627049 ZNF512Q96ME7 567 aaPredicted RBP17.76■□□□□ 0.43
FARP1-242ENST00000627049 FOPNLQ96NB1 174 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 SCUBE2Q9NQ36 999 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 SYNDIG1LA6NDD5 238 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 FAM25AB3EWG3 89 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 FAM25CB3EWG5 89 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 FAM25GB3EWG6 89 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 MYLK3Q32MK0 819 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 SYTL3Q4VX76 610 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 PAN2Q504Q3 1202 aaKnown RBP17.76■□□□□ 0.43
FARP1-242ENST00000627049 SH3BP5LQ7L8J4 393 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 SEPT5Q99719 369 aaPredicted RBP17.76■□□□□ 0.43
FARP1-242ENST00000627049 KRT84Q9NSB2 600 aa17.76■□□□□ 0.43
FARP1-242ENST00000627049 CRNNQ9UBG3 495 aaPredicted RBP17.76■□□□□ 0.43
FARP1-242ENST00000627049 BUD23O43709 281 aaKnown RBP17.75■□□□□ 0.43
FARP1-242ENST00000627049 CD86P42081 329 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 MTHFRP42898 656 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 OXCT1P55809 520 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 MGAT5BQ3V5L5 792 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 C2orf69Q8N8R5 385 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 TOP1MTQ969P6 601 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 ADGRE3Q9BY15 652 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 ADPRHL2Q9NX46 363 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 SUCOQ9UBS9 1254 aaKnown RBP17.75■□□□□ 0.43
FARP1-242ENST00000627049 GNPTGQ9UJJ9 305 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 COPG1Q9Y678 874 aaKnown RBP17.75■□□□□ 0.43
FARP1-242ENST00000627049 MYH7P12883 1935 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 AQP12BA6NM10 295 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 IRF9Q00978 393 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 PCLAFQ15004 111 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 GRIK4Q16099 956 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 SH3D19Q5HYK7 790 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 DENND5AQ6IQ26 1287 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 ZNF549Q6P9A3 640 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 GPRIN3Q6ZVF9 776 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 AQP12AQ8IXF9 295 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 TRIM39Q9HCM9 518 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.75■□□□□ 0.437e-7■■□□□ 12.9
FARP1-242ENST00000627049 CNTN6Q9UQ52 1028 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 PDE9AO76083 593 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 MPP1Q00013 466 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 CXCL9Q07325 125 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 SPATA19Q7Z5L4 167 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 OR2T12Q8NG77 320 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 NMRK2Q9NPI5 230 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.75■□□□□ 0.43
FARP1-242ENST00000627049 SNTNA6NMZ2 147 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 EI24O14681 340 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 PURAQ00577 322 aaKnown RBP17.75■□□□□ 0.43
FARP1-242ENST00000627049 TRIM32Q13049 653 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 ZNF177Q13360 481 aaPredicted RBP17.75■□□□□ 0.43
FARP1-242ENST00000627049 SLC39A4Q6P5W5 647 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 PYROXD2Q8N2H3 581 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 CCDC185Q8N715 623 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 HDAC10Q969S8 669 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 NODALQ96S42 347 aa17.75■□□□□ 0.43
FARP1-242ENST00000627049 PTBP2Q9UKA9 531 aaKnown RBP17.75■□□□□ 0.43
FARP1-242ENST00000627049 A0A1B0GVG6 124 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms