RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 ALDH7A1P49419 539 aaKnown RBP4.24□□□□□ -1.73
CDR1-202ENST00000625883 RASSF2P50749 326 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 KLF9Q13886 244 aaPredicted RBP4.24□□□□□ -1.73
CDR1-202ENST00000625883 CRYMQ14894 314 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 DRAP1Q14919 205 aaPredicted RBP4.24□□□□□ -1.73
CDR1-202ENST00000625883 ARHGEF6Q15052 776 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 ZNF284Q2VY69 593 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 RILPL1Q5EBL4 403 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 PARM1Q6UWI2 310 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 CHST9Q7L1S5 443 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 GSTA5Q7RTV2 222 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 ZNF575Q86XF7 245 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 SFTPA2Q8IWL1 248 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 ADGRF2Q8IZF7 708 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 ZBTB2Q8N680 514 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 ARFGAP1Q8N6T3 406 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 NANOGP1Q8N7R0 232 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 GABPB2Q8TAK5 448 aaPredicted RBP4.24□□□□□ -1.73
CDR1-202ENST00000625883 SLC35F5Q8WV83 523 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 POMGNT1Q8WZA1 660 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 ARHGEF26Q96DR7 871 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 PPP1R13BQ96KQ4 1090 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 SERINC2Q96SA4 455 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 PDZD7Q9H5P4 517 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 SH2D4AQ9H788 454 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 FZD3Q9NPG1 666 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 CYSLTR2Q9NS75 346 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 RRP7BPQ9NSQ0 103 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 SIRT3Q9NTG7 399 aaPredicted RBP4.24□□□□□ -1.73
CDR1-202ENST00000625883 ANKEF1Q9NU02 776 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 PCDHGB4Q9UN71 923 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 NFE2L3Q9Y4A8 694 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 HS3ST3B1Q9Y662 390 aa4.24□□□□□ -1.73
CDR1-202ENST00000625883 LY6G6EA0A0G2JKS1 128 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 TIMM44O43615 452 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 PGM3O95394 542 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 MMP2P08253 660 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 CBSLP0DN79 551 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 MCM3P25205 808 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 CBSP35520 551 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 MMP13P45452 471 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 CDH8P55286 799 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 P2RX3P56373 397 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 C21orf58P58505 322 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 PRAMEP78395 509 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 C2orf68Q2NKX9 166 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 ASTE1Q2TB18 679 aaPredicted RBP4.23□□□□□ -1.73
CDR1-202ENST00000625883 COLEC12Q5KU26 742 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 TMEM154Q6P9G4 183 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 CLEC17AQ6ZS10 378 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 GALNT5Q7Z7M9 940 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 HAPLN4Q86UW8 402 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 MB21D2Q8IYB1 491 aaPredicted RBP4.23□□□□□ -1.73
CDR1-202ENST00000625883 MMP21Q8N119 569 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 BEST2Q8NFU1 509 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 ZKSCAN4Q969J2 545 aaPredicted RBP4.23□□□□□ -1.73
CDR1-202ENST00000625883 ERGIC1Q969X5 290 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 SLC41A2Q96JW4 573 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 APOLD1Q96LR9 279 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 SLITRK1Q96PX8 696 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 RANGRFQ9HD47 186 aaPredicted RBP4.23□□□□□ -1.73
CDR1-202ENST00000625883 PLSCR4Q9NRQ2 329 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 CEPT1Q9Y6K0 416 aa4.23□□□□□ -1.73
CDR1-202ENST00000625883 HCRTR2O43614 444 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 TMCC2O75069 709 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 ZC3H11AO75152 810 aaKnown RBP eCLIP4.22□□□□□ -1.73
CDR1-202ENST00000625883 ZNF182P17025 639 aaPredicted RBP4.22□□□□□ -1.73
CDR1-202ENST00000625883 GABRB1P18505 474 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 MYF6P23409 242 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 RFX5P48382 616 aaPredicted RBP4.22□□□□□ -1.73
CDR1-202ENST00000625883 COMPP49747 757 aaPredicted RBP4.22□□□□□ -1.73
CDR1-202ENST00000625883 CLCN3P51790 818 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 TRAF1Q13077 416 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 CHAF1BQ13112 559 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 ITGADQ13349 1161 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 USP41Q3LFD5 358 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 WASHC2DQ5SRD0 308 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 MANEAQ5SRI9 462 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 C6orf141Q5SZD1 244 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 DCAF12L2Q5VW00 463 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 KIAA0930Q6ICG6 404 aaPredicted RBP4.22□□□□□ -1.73
CDR1-202ENST00000625883 JADE1Q6IE81 842 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 ANKRD54Q6NXT1 300 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 GLDNQ6ZMI3 551 aaPredicted RBP4.22□□□□□ -1.73
CDR1-202ENST00000625883 Q6ZSV7 163 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 LINGO2Q7L985 606 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 TRAPPC11Q7Z392 1133 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 CTU1Q7Z7A3 348 aaKnown RBP4.22□□□□□ -1.73
CDR1-202ENST00000625883 PATL1Q86TB9 770 aaKnown RBP4.22□□□□□ -1.73
CDR1-202ENST00000625883 CCDC13Q8IYE1 715 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 ARRDC2Q8TBH0 407 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 CALML4Q96GE6 196 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 URB1-AS1Q96HZ7 61 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 FAM110AQ9BQ89 295 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 MXD3Q9BW11 206 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 ISCUQ9H1K1 167 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 CLK4Q9HAZ1 481 aaKnown RBP4.22□□□□□ -1.73
CDR1-202ENST00000625883 CISD1Q9NZ45 108 aaKnown RBP4.22□□□□□ -1.73
CDR1-202ENST00000625883 MTMR6Q9Y217 621 aa4.22□□□□□ -1.73
CDR1-202ENST00000625883 RPS6KL1Q9Y6S9 549 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms