RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 KLC2Q9H0B6 622 aa14.78□□□□□ -0.04
PNKP-218ENST00000625299 NEU3Q9UQ49 428 aa14.78□□□□□ -0.04
PNKP-218ENST00000625299 MFHAS1Q9Y4C4 1052 aa14.78□□□□□ -0.04
PNKP-218ENST00000625299 NUDT21O43809 227 aaKnown RBP14.77□□□□□ -0.05
PNKP-218ENST00000625299 CPNE6O95741 557 aa14.77□□□□□ -0.05
PNKP-218ENST00000625299 PLEKP08567 350 aaPredicted RBP14.77□□□□□ -0.05
PNKP-218ENST00000625299 LIFP15018 202 aa14.77□□□□□ -0.05
PNKP-218ENST00000625299 SDC4P31431 198 aa14.77□□□□□ -0.05
PNKP-218ENST00000625299 CCR10P46092 362 aa14.77□□□□□ -0.05
PNKP-218ENST00000625299 SUOXP51687 545 aa14.77□□□□□ -0.05
PNKP-218ENST00000625299 MAZP56270 477 aaKnown RBP14.77□□□□□ -0.05
PNKP-218ENST00000625299 B4GALNT1Q00973 533 aa14.77□□□□□ -0.05
PNKP-218ENST00000625299 NRG1Q02297 640 aaPredicted RBP14.77□□□□□ -0.05
PNKP-218ENST00000625299 BIRC2Q13490 618 aa14.77□□□□□ -0.05
PNKP-218ENST00000625299 EFHC2Q5JST6 749 aa14.77□□□□□ -0.05
PNKP-218ENST00000625299 OGFOD3Q6PK18 319 aa14.77□□□□□ -0.05
PNKP-218ENST00000625299 ELOA2Q8IYF1 753 aaPredicted RBP14.77□□□□□ -0.05
PNKP-218ENST00000625299 CCDC185Q8N715 623 aa14.77□□□□□ -0.05
PNKP-218ENST00000625299 PAF1Q8N7H5 531 aa14.77□□□□□ -0.05
PNKP-218ENST00000625299 RXFP2Q8WXD0 754 aa14.77□□□□□ -0.05
PNKP-218ENST00000625299 CASKIN2Q8WXE0 1202 aa14.77□□□□□ -0.05
PNKP-218ENST00000625299 NKD1Q969G9 470 aa14.77□□□□□ -0.05
PNKP-218ENST00000625299 FUBP1Q96AE4 644 aaKnown RBP14.77□□□□□ -0.05
PNKP-218ENST00000625299 NUDT22Q9BRQ3 303 aa14.77□□□□□ -0.05
PNKP-218ENST00000625299 CYP4F12Q9HCS2 524 aa14.77□□□□□ -0.05
PNKP-218ENST00000625299 LHX3Q9UBR4 397 aa14.77□□□□□ -0.05
PNKP-218ENST00000625299 RHPN2P1A8MT19 583 aa14.76□□□□□ -0.05
PNKP-218ENST00000625299 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.76□□□□□ -0.05
PNKP-218ENST00000625299 B4GAT1O43505 415 aa14.76□□□□□ -0.05
PNKP-218ENST00000625299 LSM8O95777 96 aaKnown RBP14.76□□□□□ -0.05
PNKP-218ENST00000625299 MMEP08473 750 aa14.76□□□□□ -0.05
PNKP-218ENST00000625299 CR2P20023 1033 aa14.76□□□□□ -0.05
PNKP-218ENST00000625299 KELP23276 732 aa14.76□□□□□ -0.05
PNKP-218ENST00000625299 MMP12P39900 470 aa14.76□□□□□ -0.05
PNKP-218ENST00000625299 KIAA1024LP59773 190 aa14.76□□□□□ -0.05
PNKP-218ENST00000625299 FOXK1P85037 733 aa14.76□□□□□ -0.05
PNKP-218ENST00000625299 CCDC14Q49A88 953 aa14.76□□□□□ -0.05
PNKP-218ENST00000625299 INO80DQ53TQ3 878 aaPredicted RBP14.76□□□□□ -0.05
PNKP-218ENST00000625299 NOP9Q86U38 636 aaKnown RBP14.76□□□□□ -0.05
PNKP-218ENST00000625299 KIAA1524Q8TCG1 905 aa14.76□□□□□ -0.05
PNKP-218ENST00000625299 GPT2Q8TD30 523 aa14.76□□□□□ -0.05
PNKP-218ENST00000625299 CCDC74BQ96LY2 380 aa14.76□□□□□ -0.05
PNKP-218ENST00000625299 TAAR9Q96RI9 348 aa14.76□□□□□ -0.05
PNKP-218ENST00000625299 ZMYND15Q9H091 742 aa14.76□□□□□ -0.05
PNKP-218ENST00000625299 SUV39H2Q9H5I1 410 aa14.76□□□□□ -0.05
PNKP-218ENST00000625299 RETREG1Q9H6L5 497 aa14.76□□□□□ -0.05
PNKP-218ENST00000625299 ZNF71Q9NQZ8 489 aaPredicted RBP14.76□□□□□ -0.05
PNKP-218ENST00000625299 RWDD2AQ9UIY3 292 aa14.76□□□□□ -0.05
PNKP-218ENST00000625299 ATP8A1Q9Y2Q0 1164 aa14.76□□□□□ -0.05
PNKP-218ENST00000625299 FHOD1Q9Y613 1164 aa14.76□□□□□ -0.05
PNKP-218ENST00000625299 IGHV5-10-1A0A0J9YXX1 117 aa14.75□□□□□ -0.05
PNKP-218ENST00000625299 RASA4BC9J798 803 aa14.75□□□□□ -0.05
PNKP-218ENST00000625299 RASA4O43374 803 aa14.75□□□□□ -0.05
PNKP-218ENST00000625299 RECQL5O94762 991 aaPredicted RBP14.75□□□□□ -0.05
PNKP-218ENST00000625299 FGF3P11487 239 aaPredicted RBP14.75□□□□□ -0.05
PNKP-218ENST00000625299 EPHB2P29323 1055 aa14.75□□□□□ -0.05
PNKP-218ENST00000625299 CASRP41180 1078 aa14.75□□□□□ -0.05
PNKP-218ENST00000625299 NOMO3P69849 1222 aa14.75□□□□□ -0.05
PNKP-218ENST00000625299 CYTH1Q15438 398 aa14.75□□□□□ -0.05
PNKP-218ENST00000625299 ZSWIM9Q86XI8 627 aa14.75□□□□□ -0.05
PNKP-218ENST00000625299 DNAAF5Q86Y56 855 aa14.75□□□□□ -0.05
PNKP-218ENST00000625299 CAMK1DQ8IU85 385 aa14.75□□□□□ -0.05
PNKP-218ENST00000625299 PYROXD2Q8N2H3 581 aa14.75□□□□□ -0.05
PNKP-218ENST00000625299 RTL3Q8N8U3 475 aaKnown RBP14.75□□□□□ -0.05
PNKP-218ENST00000625299 JOSD2Q8TAC2 188 aa14.75□□□□□ -0.05
PNKP-218ENST00000625299 FAM172AQ8WUF8 416 aa14.75□□□□□ -0.05
PNKP-218ENST00000625299 NOL6Q9H6R4 1146 aaKnown RBP14.75□□□□□ -0.05
PNKP-218ENST00000625299 UBA2Q9UBT2 640 aaPredicted RBP14.75□□□□□ -0.05
PNKP-218ENST00000625299 NBPF19A0A087WUL8 3843 aa14.75□□□□□ -0.05
PNKP-218ENST00000625299 TSPAN11A1L157 253 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 HGSO14964 777 aaPredicted RBP14.74□□□□□ -0.05
PNKP-218ENST00000625299 TEX33O43247 280 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 ELFN1P0C7U0 828 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 MPSTP25325 297 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 UGT1A3P35503 534 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 PPM1FP49593 454 aaPredicted RBP14.74□□□□□ -0.05
PNKP-218ENST00000625299 ARSDP51689 593 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 NCAPHQ15003 741 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 AGERQ15109 404 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 TPD52L1Q16890 204 aaPredicted RBP14.74□□□□□ -0.05
PNKP-218ENST00000625299 NKAIN2Q5VXU1 208 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 BRAT1Q6PJG6 821 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 ARCQ7LC44 396 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 CACNA2D3Q8IZS8 1091 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 CCDC112Q8NEF3 446 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 C9orf43Q8TAL5 461 aaPredicted RBP14.74□□□□□ -0.05
PNKP-218ENST00000625299 GPBAR1Q8TDU6 330 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 ZDHHC1Q8WTX9 485 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 ART4Q93070 314 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 C11orf70Q9BRQ4 267 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 LGR4Q9BXB1 951 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 B3GNT4Q9C0J1 378 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 WDR26Q9H7D7 661 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 CARS2Q9HA77 564 aaKnown RBP14.74□□□□□ -0.05
PNKP-218ENST00000625299 SPATS2LQ9NUQ6 558 aaKnown RBP14.74□□□□□ -0.05
PNKP-218ENST00000625299 B3GALT1Q9Y5Z6 326 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 TEX15Q9BXT5 2789 aa14.74□□□□□ -0.05
PNKP-218ENST00000625299 PRSS38A1L453 326 aa14.73□□□□□ -0.05
PNKP-218ENST00000625299 ZNF891A8MT65 544 aaPredicted RBP14.73□□□□□ -0.05
PNKP-218ENST00000625299 A8MX80 341 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms