RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 AGR3Q8TD06 166 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 STON2Q8WXE9 905 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 WBP2Q969T9 261 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 PAWRQ96IZ0 340 aaKnown RBP19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 SUDS3Q9H7L9 328 aaPredicted RBP19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 RC3H2Q9HBD1 1191 aaKnown RBP19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 ACSS2Q9NR19 701 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 STOML2Q9UJZ1 356 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 ARIH1Q9Y4X5 557 aaPredicted RBP19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 SLCO1B7G3V0H7 640 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 SNUPNO95149 360 aaKnown RBP19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 WISP3O95389 354 aaPredicted RBP19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 CLTBP09497 229 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 CCDC166P0CW27 439 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 NCF2P19878 526 aaPredicted RBP19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 RFC2P35250 354 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 SLC26A3P40879 764 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 TWF1Q12792 350 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 FSCBQ5H9T9 825 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 SEL1L3Q68CR1 1132 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 KLC3Q6P597 504 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 PIWIL4Q7Z3Z4 852 aaKnown RBP19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 DNAJB7Q7Z6W7 309 aaPredicted RBP19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 NSMCE3Q96MG7 304 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 MAN1C1Q9NR34 630 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 NCKIPSDQ9NZQ3 722 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 VTI1BQ9UEU0 232 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 ZDHHC2Q9UIJ5 367 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 ABHD14A-ACY1A0A1B0GW23 586 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 CCDC162PA2VCL2 907 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 PRRG1O14668 218 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 CD3EAPO15446 510 aaKnown RBP19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 TSPAN3O60637 253 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 PIRTP0C851 137 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 TPBGLP0DKB5 382 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 CES1P23141 567 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 CPOXP36551 454 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 SERPINB5P36952 375 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 SCNN1BP51168 640 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 CDKN2DP55273 166 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 PFKPQ01813 784 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 NSUN2Q08J23 767 aaKnown RBP eCLIP19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 PTPRCAPQ14761 206 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 ACAP2Q15057 778 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 CYTH1Q15438 398 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 CXorf57Q6NSI4 855 aaKnown RBP19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 FAM45BPQ6NSW5 357 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 MRNIPQ6NTE8 343 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 HERC6Q8IVU3 1022 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 OR13C4Q8NGS5 318 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 FAM45AQ8TCE6 357 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 DCLRE1BQ9H816 532 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 TCF7L2Q9NQB0 619 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 MCM8Q9UJA3 840 aa19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 CORO1CQ9ULV4 474 aaPredicted RBP19.78■□□□□ 0.76
PCDHB11-202ENST00000624887 CBX4O00257 560 aa19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 GRID2O43424 1007 aa19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 BUD23O43709 281 aaKnown RBP19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 TM7SF2O76062 418 aa19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 CRTAMO95727 393 aa19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 URODP06132 367 aa19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 RBP1P09455 135 aa19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 ELF1P32519 619 aa19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 KPNB1Q14974 876 aaKnown RBP19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 LRRC26Q2I0M4 334 aa19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 KHDC1Q4VXA5 237 aaKnown RBP19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 RNF219Q5W0B1 726 aaPredicted RBP19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 C16orf59Q7L2K0 433 aa19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 TMCO2Q7Z6W1 182 aaPredicted RBP19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 TMEM150AQ86TG1 271 aa19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 TCEAL8Q8IYN2 117 aa19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 CMTM5Q96DZ9 223 aa19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 CCDC126Q96EE4 140 aa19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 SGF29Q96ES7 293 aa19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 ZFRQ96KR1 1074 aaKnown RBP19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 OR52B2Q96RD2 323 aa19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 POMKQ9H5K3 350 aa19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 SCUBE2Q9NQ36 999 aa19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 SPG21Q9NZD8 308 aa19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 PLXNA4Q9HCM2 1894 aa19.77■□□□□ 0.76
PCDHB11-202ENST00000624887 E9PBE3 544 aa19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 KIF1CO43896 1103 aaKnown RBP19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 KLHL41O60662 606 aa19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 LATS1O95835 1130 aa19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 HOXB8P17481 243 aaPredicted RBP19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 LAG3P18627 525 aa19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 OGNP20774 298 aaKnown RBP19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 COPAP53621 1224 aa19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 MXRA7P84157 204 aa19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 ACCSLQ4AC99 568 aa19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 FAM117BQ6P1L5 589 aa19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 ZNF783Q6ZMS7 281 aa19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 TRIM67Q6ZTA4 783 aa19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 DDX53Q86TM3 631 aaKnown RBP19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 RNF135Q8IUD6 432 aa19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 CCNYL1Q8N7R7 359 aa19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 OR4L1Q8NH43 312 aa19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 ANKRD49Q8WVL7 239 aa19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 EXOC2Q96KP1 924 aa19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 MUC3BQ9H195 1237 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms