RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 PTCD2Q8WV60 388 aaKnown RBP17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 RANBP9Q96S59 729 aa17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 KIFC1Q9BW19 673 aa17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 ACBD3Q9H3P7 528 aa17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 DKK3Q9UBP4 350 aa17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 RPS6KL1Q9Y6S9 549 aa17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 TSPAN11A1L157 253 aa17.89■□□□□ 0.45
PTCHD3-202ENST00000622555 C16orf96A6NNT2 1141 aa17.89■□□□□ 0.45
PTCHD3-202ENST00000622555 RNASEH1O60930 286 aaKnown RBP17.89■□□□□ 0.45
PTCHD3-202ENST00000622555 POLBP06746 335 aa17.89■□□□□ 0.45
PTCHD3-202ENST00000622555 TSHRP16473 764 aa17.89■□□□□ 0.45
PTCHD3-202ENST00000622555 TARSP26639 723 aaKnown RBP17.89■□□□□ 0.45
PTCHD3-202ENST00000622555 STARD6P59095 220 aa17.89■□□□□ 0.45
PTCHD3-202ENST00000622555 UBXN2BQ14CS0 331 aa17.89■□□□□ 0.45
PTCHD3-202ENST00000622555 HSF5Q4G112 596 aaPredicted RBP17.89■□□□□ 0.45
PTCHD3-202ENST00000622555 KIAA1211LQ6NV74 962 aa17.89■□□□□ 0.45
PTCHD3-202ENST00000622555 USP45Q70EL2 814 aa17.89■□□□□ 0.45
PTCHD3-202ENST00000622555 GLT6D1Q7Z4J2 308 aa17.89■□□□□ 0.45
PTCHD3-202ENST00000622555 HCAR2Q8TDS4 363 aa17.89■□□□□ 0.45
PTCHD3-202ENST00000622555 SPOCK2Q92563 424 aa17.89■□□□□ 0.45
PTCHD3-202ENST00000622555 ZNF669Q96BR6 464 aaPredicted RBP17.89■□□□□ 0.45
PTCHD3-202ENST00000622555 PPP1R16AQ96I34 528 aa17.89■□□□□ 0.45
PTCHD3-202ENST00000622555 MRM3Q9HC36 420 aaKnown RBP17.89■□□□□ 0.45
PTCHD3-202ENST00000622555 CD320Q9NPF0 282 aa17.89■□□□□ 0.45
PTCHD3-202ENST00000622555 HACD3Q9P035 362 aa17.89■□□□□ 0.45
PTCHD3-202ENST00000622555 KANSL1LA0AUZ9 987 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 CAPN8A6NHC0 703 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 SPAG6O75602 509 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 CRTAMO95727 393 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 SLC4A1P02730 911 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 CHRNB1P11230 501 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 XPAP23025 273 aaPredicted RBP17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 ITGB7P26010 798 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 NMBRP28336 390 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 PHBP35232 272 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 METAP1P53582 386 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 LAMB3Q13751 1172 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 LRRC32Q14392 662 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 CRYMQ14894 314 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 TERF2Q15554 542 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 UGP2Q16851 508 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 ANKRD20A4Q4UJ75 823 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 LRRC73Q5JTD7 316 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 EOGTQ5NDL2 527 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 FAM46CQ5VWP2 391 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 ARMC3Q5W041 872 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 STEAP4Q687X5 459 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 CACUL1Q86Y37 369 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 MDGA1Q8NFP4 955 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 GSDMBQ8TAX9 411 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 MFSD3Q96ES6 412 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 RSPH9Q9H1X1 276 aaPredicted RBP17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 PLAC1Q9HBJ0 212 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 MAGEE1Q9HCI5 957 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 LTB4R2Q9NPC1 389 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 MED4Q9NPJ6 270 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 DYRK4Q9NR20 520 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 ZNF711Q9Y462 761 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 MTF2Q9Y483 593 aaPredicted RBP17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 ARL5AQ9Y689 179 aa17.88■□□□□ 0.45
PTCHD3-202ENST00000622555 UPK3BL1B0FP48 263 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 UPK3BL2E5RIL1 263 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 LDB2O43679 373 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 USP1O94782 785 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 ABHD2P08910 425 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 GSTA2P09210 222 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 TIMP2P16035 220 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 COL9A1P20849 921 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 HNF1BP35680 557 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 SATB1Q01826 763 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 TAF1AQ15573 450 aaPredicted RBP17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 SPANXN3Q5MJ09 141 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 Q6ZS52 159 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 PARS2Q7L3T8 475 aaKnown RBP17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 TTC7BQ86TV6 843 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 TMEM135Q86UB9 458 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 ZNF687Q8N1G0 1237 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 OR2T3Q8NH03 318 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 ARRDC3Q96B67 414 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 SCRN2Q96FV2 425 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 ZNF778Q96MU6 729 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 FCRL3Q96P31 734 aaPredicted RBP17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 FOXQ1Q9C009 403 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 FBRSQ9HAH7 460 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 LMAN1LQ9HAT1 526 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 MMP17Q9ULZ9 603 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 PLAAQ9Y263 795 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 PPIL1Q9Y3C6 166 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 KCTD3Q9Y597 815 aa17.87■□□□□ 0.45
PTCHD3-202ENST00000622555 A0A087WUV0 522 aaPredicted RBP17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 A0A0U1RQS6 177 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 A0A1W2PQF6 199 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 MROH6A6NGR9 719 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 A8MX80 341 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 AURKAO14965 403 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 BUD23O43709 281 aaKnown RBP17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 TSTD2Q5T7W7 516 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 ZNF776Q68DI1 518 aaPredicted RBP17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 NLRP9Q7RTR0 991 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms