RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 UNC50Q53HI1 259 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 NOMO2Q5JPE7 1267 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 ACBD5Q5T8D3 534 aaPredicted RBP9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 MARC1Q5VT66 337 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 REP15Q6BDI9 236 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 LARP4Q71RC2 724 aaKnown RBP eCLIP9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 CILP2Q8IUL8 1156 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 DCP1BQ8IZD4 617 aaKnown RBP9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 ATP6V0D2Q8N8Y2 350 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 OR13J1Q8NGT2 312 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 ARRDC2Q8TBH0 407 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 NAT14Q8WUY8 206 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 HMCESQ96FZ2 354 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 KLHL32Q96NJ5 620 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 ASB2Q96Q27 587 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 SLC25A23Q9BV35 468 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 MRPS26Q9BYN8 205 aaKnown RBP9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 ZYG11BQ9C0D3 744 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 ATXN3LQ9H3M9 355 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 SUDS3Q9H7L9 328 aaPredicted RBP9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 COPS7BQ9H9Q2 264 aaPredicted RBP9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 POPDC3Q9HBV1 291 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 VCX3AQ9NNX9 186 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 TNFRSF12AQ9NP84 129 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 NT5MQ9NPB1 228 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 CACNA2D2Q9NY47 1150 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 UBAP1Q9NZ09 502 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 MPP6Q9NZW5 540 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 EPS15L1Q9UBC2 864 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 TRAF6Q9Y4K3 522 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 AP4B1Q9Y6B7 739 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 SQORQ9Y6N5 450 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 ANKRD36A6QL64 1941 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 MANSC4A6NHS7 340 aaPredicted RBP9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 BBIP1A8MTZ0 92 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 E7ENX8 843 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 TMEM189-UBE2V1I3L0A0 370 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 J3KR12 359 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 GPC4O75487 556 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 RNASEH2AO75792 299 aaKnown RBP9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 SRP72O76094 671 aaKnown RBP9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 OAZ2O95190 189 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 MOCS2O96007 188 aaPredicted RBP9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 FGF4P08620 206 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 ATXN1LP0C7T5 689 aaKnown RBP9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 CYBAP13498 195 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 CD86P42081 329 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 MAGEA11P43364 429 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 RPL5P46777 297 aaKnown RBP9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 C1QTNF8P60827 252 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 RHDQ02161 417 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 DSC2Q02487 901 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 SLC10A7Q0GE19 358 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 PDAP1Q13442 181 aaKnown RBP9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 IHHQ14623 411 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 LPIN1Q14693 890 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 RBBP5Q15291 538 aaKnown RBP9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 TAF1CQ15572 869 aaPredicted RBP9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 TRIP4Q15650 581 aaPredicted RBP9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 ADRM1Q16186 407 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 PCSK7Q16549 785 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 UGT3A2Q3SY77 523 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 MGAT5BQ3V5L5 792 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 PAN2Q504Q3 1202 aaKnown RBP9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 MS4A13Q5J8X5 152 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 GNASQ5JWF2 1037 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 SIRPB2Q5JXA9 342 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 ZNF678Q5SXM1 525 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 TMEM207Q6UWW9 146 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 CXCL17Q6UXB2 119 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 ISCA2Q86U28 154 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 SPATA24Q86W54 205 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 CLYBLQ8N0X4 340 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 NUP93Q8N1F7 819 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 DDI1Q8WTU0 396 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 ANKRD49Q8WVL7 239 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 LPGAT1Q92604 370 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 TMA16Q96EY4 203 aaKnown RBP9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 FUBP3Q96I24 572 aaKnown RBP eCLIP9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 FEM1CQ96JP0 617 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 ZFRQ96KR1 1074 aaKnown RBP9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 PRICKLE1Q96MT3 831 aaPredicted RBP9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 CYP2S1Q96SQ9 504 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 NDNQ99608 321 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 ADAM2Q99965 735 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 FBXO44Q9H4M3 255 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 CYP4F12Q9HCS2 524 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 TMEM181Q9P2C4 612 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 CROTQ9UKG9 612 aa9.65□□□□□ -0.86
IGHV3-54-201ENST00000622166 FAM92AA1XBS5 289 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 MOXD2PA6NHM9 499 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 UBFD1O14562 309 aaKnown RBP9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 MRASO14807 208 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 LDB2O43679 373 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 NRP2O60462 931 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 CELF2O95319 508 aaKnown RBP9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 TNFAIP8O95379 198 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 EPOP01588 193 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 TFAP2AP05549 437 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms