RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 LONRF2Q1L5Z9 754 aa14.38□□□□□ -0.11
CBWD3-217ENST00000621474 TRIM61Q5EBN2 209 aa14.38□□□□□ -0.11
CBWD3-217ENST00000621474 PAPD7Q5XG87 772 aaKnown RBP14.38□□□□□ -0.11
CBWD3-217ENST00000621474 DRICH1Q6PGQ1 229 aaPredicted RBP14.38□□□□□ -0.11
CBWD3-217ENST00000621474 DPPA4Q7L190 304 aa14.38□□□□□ -0.11
CBWD3-217ENST00000621474 ALYREFQ86V81 257 aaKnown RBP14.38□□□□□ -0.11
CBWD3-217ENST00000621474 CBARPQ8N350 705 aaPredicted RBP14.38□□□□□ -0.11
CBWD3-217ENST00000621474 PRELID2Q8N945 189 aa14.38□□□□□ -0.11
CBWD3-217ENST00000621474 GLIS1Q8NBF1 620 aa14.38□□□□□ -0.11
CBWD3-217ENST00000621474 FEM1CQ96JP0 617 aa14.38□□□□□ -0.11
CBWD3-217ENST00000621474 MRGPRX2Q96LB1 330 aa14.38□□□□□ -0.11
CBWD3-217ENST00000621474 MLPHQ9BV36 600 aaPredicted RBP14.38□□□□□ -0.11
CBWD3-217ENST00000621474 SLC17A9Q9BYT1 436 aa14.38□□□□□ -0.11
CBWD3-217ENST00000621474 FRMD8P1Q9BZ68 369 aaPredicted RBP14.38□□□□□ -0.11
CBWD3-217ENST00000621474 VPS45Q9NRW7 570 aa14.38□□□□□ -0.11
CBWD3-217ENST00000621474 TPX2Q9ULW0 747 aaKnown RBP14.38□□□□□ -0.11
CBWD3-217ENST00000621474 CA5BQ9Y2D0 317 aa14.38□□□□□ -0.11
CBWD3-217ENST00000621474 MYLKQ15746 1914 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 A0A0J9YYE9 177 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 A0A1W2PR77 199 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 LNP1A1A4G5 178 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 A8MX80 341 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 ANKRD66B4E2M5 251 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 H0Y8X5 98 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 CES2O00748 559 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 SLC31A1O15431 190 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 PAK4O96013 591 aaPredicted RBP14.37□□□□□ -0.11
CBWD3-217ENST00000621474 TRBC1P01850 177 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 CTPS1P17812 591 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 XPAP23025 273 aaPredicted RBP14.37□□□□□ -0.11
CBWD3-217ENST00000621474 PSMB4P28070 264 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 DPP6P42658 865 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 RACK1P63244 317 aaKnown RBP14.37□□□□□ -0.11
CBWD3-217ENST00000621474 BNC1Q01954 994 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 SNX1Q13596 522 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 PCSK7Q16549 785 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 CCNG2Q16589 344 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 KCTD19Q17RG1 926 aaPredicted RBP14.37□□□□□ -0.11
CBWD3-217ENST00000621474 SETMARQ53H47 684 aaPredicted RBP14.37□□□□□ -0.11
CBWD3-217ENST00000621474 ERAP2Q6P179 960 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 LIPIQ6XZB0 460 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 KDM7AQ6ZMT4 941 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 KDELC2Q7Z4H8 507 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 PRUNE1Q86TP1 453 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 TSPAN33Q86UF1 283 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 KLHDC8BQ8IXV7 354 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 ACTRT1Q8TDG2 376 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 SERAC1Q96JX3 654 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 HINFPQ9BQA5 517 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 RSPH14Q9UHP6 348 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 ZKSCAN5Q9Y2L8 839 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 COQ6Q9Y2Z9 468 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 CABIN1Q9Y6J0 2220 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 CEP250Q9BV73 2442 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 A0A1B0GTW7 788 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 LOC285095A0A1B0GVY8 99 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 CFAP69A5D8W1 941 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 PMPCBO75439 489 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 GCATO75600 419 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 METTL18O95568 372 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 ITGAVP06756 1048 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 C6P13671 934 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 HNF1BP35680 557 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 CSNK1EP49674 416 aaKnown RBP14.37□□□□□ -0.11
CBWD3-217ENST00000621474 LIG3P49916 1009 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 RPL26P61254 145 aaKnown RBP14.37□□□□□ -0.11
CBWD3-217ENST00000621474 OLIG2Q13516 323 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 GALNT3Q14435 633 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 CNGA3Q16281 694 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 CDKN3Q16667 212 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 QPCTQ16769 361 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 DUOXA1Q1HG43 343 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 NAPEPLDQ6IQ20 393 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 PRR23CQ6ZRP0 262 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 LPCAT1Q8NF37 534 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 CXorf40AQ8TE69 158 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 CENPTQ96BT3 561 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 LYSMD1Q96S90 227 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 NAPGQ99747 312 aaPredicted RBP14.37□□□□□ -0.11
CBWD3-217ENST00000621474 MYOCQ99972 504 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 SUSD2Q9UGT4 822 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 FAM153AQ9UHL3 310 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 RPL26L1Q9UNX3 145 aaKnown RBP14.37□□□□□ -0.11
CBWD3-217ENST00000621474 DMTF1Q9Y222 760 aa14.37□□□□□ -0.11
CBWD3-217ENST00000621474 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.37□□□□□ -0.11
CBWD3-217ENST00000621474 ASCC3Q8N3C0 2202 aaKnown RBP14.36□□□□□ -0.11
CBWD3-217ENST00000621474 CAPN8A6NHC0 703 aa14.36□□□□□ -0.11
CBWD3-217ENST00000621474 OPHN1O60890 802 aa14.36□□□□□ -0.11
CBWD3-217ENST00000621474 TM7SF2O76062 418 aa14.36□□□□□ -0.11
CBWD3-217ENST00000621474 HEXIM1O94992 359 aaKnown RBP14.36□□□□□ -0.11
CBWD3-217ENST00000621474 ATXN1LP0C7T5 689 aaKnown RBP14.36□□□□□ -0.11
CBWD3-217ENST00000621474 HNRNPA2B1P22626 353 aaKnown RBP14.36□□□□□ -0.11
CBWD3-217ENST00000621474 STIP1P31948 543 aaKnown RBP14.36□□□□□ -0.11
CBWD3-217ENST00000621474 KCNJ1P48048 391 aa14.36□□□□□ -0.11
CBWD3-217ENST00000621474 GRIA4P48058 902 aa14.36□□□□□ -0.11
CBWD3-217ENST00000621474 AFF3P51826 1226 aaKnown RBP14.36□□□□□ -0.11
CBWD3-217ENST00000621474 WNT3AP56704 352 aa14.36□□□□□ -0.11
CBWD3-217ENST00000621474 CDK18Q07002 472 aa14.36□□□□□ -0.11
CBWD3-217ENST00000621474 AGERQ15109 404 aa14.36□□□□□ -0.11
CBWD3-217ENST00000621474 HS1BP3Q53T59 392 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms