RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 ZNF669Q96BR6 464 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 LMLNQ96KR4 655 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 ZNF778Q96MU6 729 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 GCNAQ96QF7 691 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 RANBP9Q96S59 729 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 POLR1EQ9GZS1 481 aaKnown RBP12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 TASP1Q9H6P5 420 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 TREX1Q9NSU2 369 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 MKS1Q9NXB0 559 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 DLGAP2Q9P1A6 1054 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 SAMD15Q9P1V8 674 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 SLC17A6Q9P2U8 582 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 SIT1Q9Y3P8 196 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 RIF1Q5UIP0 2472 aaKnown RBP12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 TICRRQ7Z2Z1 1910 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 COL4A2P08572 1712 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 HELZP42694 1942 aaKnown RBP12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 FANCMQ8IYD8 2048 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 E2F8A0AVK6 867 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 GJB3O75712 270 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 EPOP01588 193 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 DCNP07585 359 aaKnown RBP12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 SNRPAP09012 282 aaKnown RBP12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 KRT4P19013 534 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 FCARP24071 287 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 ARNTP27540 789 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 NMBRP28336 390 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 RGRP47804 291 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 SERPINB9P50453 376 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 SEC24CP53992 1094 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 OXCT1P55809 520 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 ANGPT1Q15389 498 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 SLC44A4Q53GD3 710 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 RNF219Q5W0B1 726 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 IL31Q6EBC2 164 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 PACS1Q6VY07 963 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 LEKR1Q6ZMV7 388 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 CTAGE3PQ8IX95 158 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 CMTM8Q8IZV2 173 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 PJA1Q8NG27 643 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 ISL2Q96A47 359 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 ELSPBP1Q96BH3 223 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 MTBPQ96DY7 904 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 TMA16Q96EY4 203 aaKnown RBP12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 SGSM3Q96HU1 749 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 TRIB3Q96RU7 358 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 SMC6Q96SB8 1091 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 SEMA3CQ99985 751 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 FOXQ1Q9C009 403 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 UBA2Q9UBT2 640 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 LSM7Q9UK45 103 aaKnown RBP12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 CCL26Q9Y258 94 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 TCAF1Q9Y4C2 921 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 PSAT1Q9Y617 370 aa12.51□□□□□ -0.41
TNFAIP3-211ENST00000621150 NUP210Q8TEM1 1887 aaPredicted RBP12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 TTC24A2A3L6 582 aaPredicted RBP12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 GMNCA6NCL1 334 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 TRIM49D1C9J1S8 452 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 GFRA3O60609 400 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 DNAJC6O75061 913 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 SIN3BO75182 1162 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 SPAG7O75391 227 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 KRT37O76014 449 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 ERVK-10P10266 1014 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 GLULP15104 373 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 CNTFP26441 200 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 ARCN1P48444 511 aaKnown RBP12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 NEK3P51956 506 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 PFKPQ01813 784 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 DNAJC3Q13217 504 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 TEAD2Q15562 447 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 SLC1A5Q15758 541 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 MLF2Q15773 248 aaPredicted RBP12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 INO80DQ53TQ3 878 aaPredicted RBP12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 FAM78AQ5JUQ0 283 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 GPR158Q5T848 1215 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 TEDDM1Q5T9Z0 273 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 FYB2Q5VWT5 728 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 CNTN4Q8IWV2 1026 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 CNPY4Q8N129 248 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 FAM160A2Q8N612 972 aaPredicted RBP12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 CKAP2Q8WWK9 683 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 USP13Q92995 863 aaPredicted RBP12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 SHDQ96IW2 340 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 FEM1CQ96JP0 617 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 ZSWIM3Q96MP5 696 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 FEM1AQ9BSK4 669 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 FSD1LQ9BXM9 530 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 IKBKGQ9Y6K9 419 aa12.5□□□□□ -0.41
TNFAIP3-211ENST00000621150 SPTBN4Q9H254 2564 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 MYLKQ15746 1914 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 CXorf51AA0A1B0GTR3 108 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 KANSL1LA0AUZ9 987 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 SNAP91O60641 907 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 KRT38O76015 456 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 NEBLO76041 1014 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 FAM107AO95990 144 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 MT-ND3P03897 115 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 DHRS4L1P0CG22 281 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms