RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 CDO1Q16878 200 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 RBM48Q5RL73 367 aaKnown RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 SEL1L3Q68CR1 1132 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 ADGRG6Q86SQ4 1221 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 CAND1Q86VP6 1230 aaKnown RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 ZDHHC17Q8IUH5 632 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 CENPOQ9BU64 300 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 MED28Q9H204 178 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 EXTL2Q9UBQ6 330 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 PGK2P07205 417 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 IDH3AP50213 366 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 SDHAF4Q5VUM1 108 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 RHBDF2Q6PJF5 856 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 HPS6Q86YV9 775 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 MCPH1Q8NEM0 835 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 RXFP2Q8WXD0 754 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 PLCL2Q9UPR0 1127 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 PCDHB5Q9Y5E4 795 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 ST14Q9Y5Y6 855 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 SPATA31A1Q5TZJ5 1347 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 GNASQ5JWF2 1037 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 SLC9A6Q92581 669 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 FCGR1BQ92637 280 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 POLR3FQ9H1D9 316 aaPredicted RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 SLA2Q9H6Q3 261 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 LRRC19Q9H756 370 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 JPH1Q9HDC5 661 aaPredicted RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 PLA2G4CQ9UP65 541 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 CD40LGP29965 261 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 CCNIQ14094 377 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 LY6KQ17RY6 165 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 FASTKD1Q53R41 847 aaKnown RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 GALNT11Q8NCW6 608 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 TEFMQ96QE5 360 aaKnown RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 MTG1Q9BT17 334 aaPredicted RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 FOLH1BQ9HBA9 442 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 KCNIP3Q9Y2W7 256 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 SNCAIPQ9Y6H5 919 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 CLUHO75153 1309 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 A0A1W2PRQ8 180 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 ATG7O95352 703 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 NPR2P20594 1047 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 YWHAHQ04917 246 aaPredicted RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 NR1D2Q14995 579 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 ZIK1Q3SY52 487 aaPredicted RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 LBHQ53QV2 105 aaPredicted RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 TRIQKQ629K1 86 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 ELP2Q6IA86 826 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 CASP12Q6UXS9 341 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 RGS9BPQ6ZS82 235 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 NXNL1Q96CM4 212 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 DUSP12Q9UNI6 340 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 PCDHGB2Q9Y5G2 931 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 MYH10P35580 1976 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 SNRPB2P08579 225 aaKnown RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 NUDT17P0C025 328 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 ETV3P41162 512 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 ASMTP46597 345 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 YBX1P67809 324 aaKnown RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 C1QBPQ07021 282 aaKnown RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 TMEM31Q5JXX7 168 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 EID3Q8N140 333 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 PLD6Q8N2A8 252 aaKnown RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 RAB42Q8N4Z0 105 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 ACTL9Q8TC94 416 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 TRAF4Q9BUZ4 470 aaPredicted RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 DCAF16Q9NXF7 216 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 ENTPD3O75355 529 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 METTL18O95568 372 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 SLC3A1Q07837 685 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 NCCRP1Q6ZVX7 275 aaPredicted RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 SATL1Q86VE3 508 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 ZNF564Q8TBZ8 553 aaPredicted RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 ZHX1-C8orf76Q96EF9 292 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 S100A14Q9HCY8 104 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 ST3GAL5Q9UNP4 418 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 TLR6Q9Y2C9 796 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 TACSTD2P09758 323 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 AARS2Q5JTZ9 985 aaKnown RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 HMBOX1Q6NT76 420 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 IPCEF1Q8WWN9 437 aaPredicted RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 PIGKQ92643 395 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 DAPK2Q9UIK4 370 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 GRIP1Q9Y3R0 1128 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 CSADQ9Y600 493 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 A8MU76 341 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 KCNC1P48547 511 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 STYK1Q6J9G0 422 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 CLYBLQ8N0X4 340 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 ULK4Q96C45 1275 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 VRK1Q99986 396 aaPredicted RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 PBDC1Q9BVG4 233 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 FABP12A6NFH5 140 aa3.09□□□□□ -1.92
NEB-220ENST00000618972 ARHGEF33A8MVX0 844 aa3.09□□□□□ -1.92
NEB-220ENST00000618972 E9PBE3 544 aa3.09□□□□□ -1.92
NEB-220ENST00000618972 WWP2O00308 870 aa3.09□□□□□ -1.92
NEB-220ENST00000618972 MMP10P09238 476 aa3.09□□□□□ -1.92
NEB-220ENST00000618972 CLTBP09497 229 aa3.09□□□□□ -1.92
NEB-220ENST00000618972 SDC2P34741 201 aa3.09□□□□□ -1.92
NEB-220ENST00000618972 EFNA5P52803 228 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms