RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 BPTFQ12830 3046 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 A0A0J9YYE9 177 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 SPTY2D1-AS1A0A0U1RR47 76 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 DCDC2BA2VCK2 349 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 POM121BA6NF01 834 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 A6NNZ2 444 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 PSMD11O00231 422 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 YKT6O15498 198 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 MTSS1O43312 755 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 KRT86O43790 486 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 TM7SF2O76062 418 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 DKK1O94907 266 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 KCNK5O95279 499 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 TRBC1P01850 177 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 HOXC4P09017 264 aaPredicted RBP8.29□□□□□ -1.08
NEK3-209ENST00000618856 CCDC175P0C221 793 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 C6P13671 934 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 TNNT1P13805 278 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 LHCGRP22888 699 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 PTPN3P26045 913 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 CD68P34810 354 aaPredicted RBP8.29□□□□□ -1.08
NEK3-209ENST00000618856 IGFALSP35858 605 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 TRIM23P36406 574 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 RABIFP47224 123 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 ATXN3P54252 364 aaPredicted RBP8.29□□□□□ -1.08
NEK3-209ENST00000618856 CLDN2P57739 230 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 YPEL5P62699 121 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 DYNLT1P63172 113 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 DSC2Q02487 901 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 WSCD2Q2TBF2 565 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 LRRC73Q5JTD7 316 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 TPRG1LQ5T0D9 272 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 ZFYVE27Q5T4F4 411 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 ARMC12Q5T9G4 340 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 MEI1Q5TIA1 1274 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 LIPIQ6XZB0 460 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 PEX26Q7Z412 305 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 NLRP8Q86W28 1048 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 KLHDC8BQ8IXV7 354 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 CCNYQ8ND76 341 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 OR13H1Q8NG92 308 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 CXorf40AQ8TE69 158 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 TFB1MQ8WVM0 346 aaKnown RBP8.29□□□□□ -1.08
NEK3-209ENST00000618856 P3H4Q92791 437 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 KLK6Q92876 244 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 KLHDC7BQ96G42 594 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 COQ10AQ96MF6 247 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 VAT1Q99536 393 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 FZD3Q9NPG1 666 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 GDF3Q9NR23 364 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 MBNL1Q9NR56 388 aaKnown RBP8.29□□□□□ -1.08
NEK3-209ENST00000618856 AASDHPPTQ9NRN7 309 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 TM7SF3Q9NS93 570 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 HAUS2Q9NVX0 235 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 B4GALT6Q9UBX8 382 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 PCOLCE2Q9UKZ9 415 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 CA5BQ9Y2D0 317 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 PCDHB9Q9Y5E1 797 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 TMEM131Q92545 1883 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 TP53BP1Q12888 1972 aaPredicted RBP8.29□□□□□ -1.08
NEK3-209ENST00000618856 SHROOM3Q8TF72 1996 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 CNOT1A5YKK6 2376 aaKnown RBP8.29□□□□□ -1.08
NEK3-209ENST00000618856 CEP295Q9C0D2 2601 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 LOC285095A0A1B0GVY8 99 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 NPIPB15A6NHN6 443 aaPredicted RBP8.28□□□□□ -1.08
NEK3-209ENST00000618856 NEMP1O14524 444 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 KCNK3O14649 394 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 FPGTO14772 594 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 FLRT2O43155 660 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 HEXIM1O94992 359 aaKnown RBP8.28□□□□□ -1.08
NEK3-209ENST00000618856 TJP3O95049 919 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 FTCDO95954 541 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 CPP00450 1065 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 PRKCGP05129 697 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 THEGLP0DJG4 465 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 GIMD1P0DJR0 217 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 TEAD1P28347 426 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 EPHA8P29322 1005 aaPredicted RBP8.28□□□□□ -1.08
NEK3-209ENST00000618856 VIPR1P32241 457 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 HNF1BP35680 557 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 CCT8P50990 548 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 NAP1L1P55209 391 aaKnown RBP8.28□□□□□ -1.08
NEK3-209ENST00000618856 C21orf59P57076 290 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 FOXK2Q01167 660 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 OTUD4Q01804 1114 aaKnown RBP8.28□□□□□ -1.08
NEK3-209ENST00000618856 DPTQ07507 201 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 AP1B1Q10567 949 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 SGCGQ13326 291 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 FZD2Q14332 565 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 CNGA3Q16281 694 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 ODF2Q5BJF6 829 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 CFAP58Q5T655 872 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 KAZNQ674X7 775 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 ESRP1Q6NXG1 681 aaKnown RBP8.28□□□□□ -1.08
NEK3-209ENST00000618856 AADACL2Q6P093 401 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 Q6ZSR6 202 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 DGLUCYQ7Z3D6 616 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 TECPR1Q7Z6L1 1165 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 ADAT2Q7Z6V5 191 aaKnown RBP8.28□□□□□ -1.08
NEK3-209ENST00000618856 CCDC50Q8IVM0 306 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms