RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 OR2L3Q8NG85 312 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 ANKHQ9HCJ1 492 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 A0A1B0GVC2 190 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 E9PAM4 449 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 AVILO75366 819 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 APOC3P02656 99 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 ABHD2P08910 425 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 RPS9P46781 194 aaKnown RBP15.08■□□□□ 0
COL5A1-208ENST00000618395 AUHQ13825 339 aaKnown RBP15.08■□□□□ 0
COL5A1-208ENST00000618395 EFCAB3Q8N7B9 438 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 PI4K2AQ9BTU6 479 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 PNO1Q9NRX1 252 aaKnown RBP15.08■□□□□ 0
COL5A1-208ENST00000618395 TAS2R13Q9NYV9 303 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 SGMS1Q86VZ5 419 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 CEP295NLQ96MC4 621 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 MIPEPQ99797 713 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 LRRC4BQ9NT99 713 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 TGDSO95455 350 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 CYBBP04839 570 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 ZNF557Q8N988 423 aaPredicted RBP15.07■□□□□ 0
COL5A1-208ENST00000618395 DNAJB4Q9UDY4 337 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 PPIEQ9UNP9 301 aaKnown RBP15.07■□□□□ 0
COL5A1-208ENST00000618395 WDR27A2RRH5 827 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 MYMKA6NI61 221 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 ZNF99A8MXY4 864 aaPredicted RBP15.07■□□□□ 0
COL5A1-208ENST00000618395 USP17L15C9J2P7 530 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 USP17L13C9JLJ4 530 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 USP17L11C9JVI0 530 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 USP17L18D6R9N7 530 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 USP17L22D6RA61 530 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 USP17L17D6RBQ6 530 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 USP17L19D6RCP7 530 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 USP17L20D6RJB6 530 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 ITGB3P05106 788 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 ITGB1P05556 798 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 CYP3A4P08684 503 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 RARAP10276 462 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 IL1R1P14778 569 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 ALDH4A1P30038 563 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 USP17L24Q0WX57 530 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 GRK1Q15835 563 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 AKR1C8PQ5T2L2 129 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 LIN37Q96GY3 246 aaPredicted RBP15.07■□□□□ 0
COL5A1-208ENST00000618395 LURAP1Q96LR2 239 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 PRKD2Q9BZL6 878 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 FAM49AQ9H0Q0 323 aaPredicted RBP15.07■□□□□ 0
COL5A1-208ENST00000618395 WDCPQ9H6R7 721 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 RNASEH1O60930 286 aaKnown RBP15.07■□□□□ 0
COL5A1-208ENST00000618395 UPP2O95045 317 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 HLA-DRAP01903 254 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 ACSL1P33121 698 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 PLK1P53350 603 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 RPL26P61254 145 aaKnown RBP15.07■□□□□ 0
COL5A1-208ENST00000618395 SUPT20HL1Q3ZLR7 823 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 ZYG11AQ6WRX3 759 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 OR2L2Q8NH16 312 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 SEPT5Q99719 369 aaPredicted RBP15.07■□□□□ 0
COL5A1-208ENST00000618395 EBF2Q9HAK2 575 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 PCDHGB3Q9Y5G1 929 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 IL18RAPO95256 599 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 IL2P60568 153 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 SPATA2LQ8IUW3 424 aaPredicted RBP15.07■□□□□ 0
COL5A1-208ENST00000618395 RBM15BQ8NDT2 890 aaKnown RBP15.07■□□□□ 0
COL5A1-208ENST00000618395 KAT2BQ92831 832 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 CLPTM1LQ96KA5 538 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 NEDD4LQ96PU5 975 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 ADGRE2Q9UHX3 823 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 GLDCP23378 1020 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 TSPAN5P62079 268 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 MXD1Q05195 221 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 ADGRE3Q9BY15 652 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 OXCT2Q9BYC2 517 aaPredicted RBP15.07■□□□□ 0
COL5A1-208ENST00000618395 TM9SF3Q9HD45 589 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 PACSIN3Q9UKS6 424 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 RPS3P23396 243 aaKnown RBP eCLIP15.07■□□□□ 0
COL5A1-208ENST00000618395 GRIA4P48058 902 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 ACOT2P49753 483 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 RBM48Q5RL73 367 aaKnown RBP15.07■□□□□ 0
COL5A1-208ENST00000618395 NUDT18Q6ZVK8 323 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 RNF44Q7L0R7 432 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 SLCO1B3Q9NPD5 702 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 ZMYM5Q9UJ78 669 aa15.07■□□□□ 0
COL5A1-208ENST00000618395 MB21D2Q8IYB1 491 aaPredicted RBP15.06■□□□□ 0
COL5A1-208ENST00000618395 FNDC8Q8TC99 324 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 SLC20A1Q8WUM9 679 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 GREM2Q9H772 168 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 SLC33A1O00400 549 aaPredicted RBP15.06■□□□□ 0
COL5A1-208ENST00000618395 ALDH1A1P00352 501 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 NPPAP01160 153 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 COX7A2P14406 83 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 SLC7A2P52569 658 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 PRKCEQ02156 737 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 RIOX2Q8IUF8 465 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 ZNF433Q8N7K0 673 aaPredicted RBP15.06■□□□□ 0
COL5A1-208ENST00000618395 TLR10Q9BXR5 811 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 MYBP10242 640 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 ZNF268Q14587 947 aaPredicted RBP15.06■□□□□ 0
COL5A1-208ENST00000618395 LIPMQ5VYY2 423 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 ADGRD2Q7Z7M1 963 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 LAPTM4BQ86VI4 370 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms